Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 AC087623.3-201ENST00000607047 1098 ntBASIC13.03□□□□□ -0.32
MRPL54Q6P161 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL54Q6P161 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL54Q6P161 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
MRPL54Q6P161 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL54Q6P161 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 MYC-209ENST00000641252 345 ntBASIC13.02□□□□□ -0.33
MRPL54Q6P161 OR2I1P-210ENST00000642037 4691 ntBASIC13.02□□□□□ -0.33
MRPL54Q6P161 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 HOXB1-202ENST00000577092 1414 ntBASIC13.02□□□□□ -0.33
MRPL54Q6P161 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 AC099063.4-201ENST00000641099 1602 ntBASIC13.02□□□□□ -0.33
MRPL54Q6P161 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.02□□□□□ -0.33
MRPL54Q6P161 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL54Q6P161 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 NIFKP9-201ENST00000419265 221 ntBASIC13.01□□□□□ -0.33
MRPL54Q6P161 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.01□□□□□ -0.33
MRPL54Q6P161 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 KRT16P5-201ENST00000455284 522 ntBASIC13.01□□□□□ -0.33
MRPL54Q6P161 AC008040.2-201ENST00000461049 708 ntBASIC13.01□□□□□ -0.33
MRPL54Q6P161 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL54Q6P161 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.01□□□□□ -0.33
MRPL54Q6P161 KRT8P9-201ENST00000558927 1449 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms