Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 ELK2BP-201ENST00000415014 1224 ntBASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PPP4R3AQ6IN85 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.52■□□□□ 0.71
PPP4R3AQ6IN85 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PPP4R3AQ6IN85 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
PPP4R3AQ6IN85 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 AC136632.2-201ENST00000512891 861 ntBASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 OR6D1P-203ENST00000641209 4860 ntBASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.51■□□□□ 0.71
PPP4R3AQ6IN85 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 TERC-201ENST00000602385 541 ntBASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 AL356488.2-201ENST00000602755 427 ntBASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 PGM5P2-202ENST00000637225 1043 ntBASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 AL805961.1-202ENST00000641562 540 ntBASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 CROCCP1-201ENST00000426910 5675 ntBASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R3AQ6IN85 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 AP002414.3-201ENST00000589352 1468 ntBASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 AP002414.1-201ENST00000391405 1147 ntBASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 PTCHD3P3-201ENST00000403073 906 ntBASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 AC093909.1-201ENST00000504731 1122 ntBASIC19.49■□□□□ 0.71
PPP4R3AQ6IN85 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms