Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 KRT17P6-201ENST00000453795 1220 ntBASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 MINOS1P3-201ENST00000457048 203 ntBASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 IGHV3-52-201ENST00000519770 353 ntBASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 NPAP1P7-201ENST00000613027 823 ntBASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.16■□□□□ 0.18
PDZK1Q5T2W1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AC063926.3-201ENST00000624734 5658 ntBASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AP000867.3-201ENST00000524675 377 ntBASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AC092119.3-201ENST00000612618 583 ntBASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 AC093458.2-201ENST00000623150 629 ntBASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.15■□□□□ 0.18
PDZK1Q5T2W1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.14■□□□□ 0.18
PDZK1Q5T2W1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.14■□□□□ 0.18
PDZK1Q5T2W1 NSUN5P1-202ENST00000421140 1535 ntBASIC16.14■□□□□ 0.18
PDZK1Q5T2W1 NSUN5P2-203ENST00000457352 1529 ntBASIC16.14■□□□□ 0.18
PDZK1Q5T2W1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 MYCLP1-201ENST00000372451 1075 ntBASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.14■□□□□ 0.17
PDZK1Q5T2W1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms