Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 RAB43P1-201ENST00000561790 589 ntBASIC21.92■■□□□ 1.1
NUP188Q5SRE5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AC008267.7-201ENST00000624570 1194 ntBASIC21.92■■□□□ 1.1
NUP188Q5SRE5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.92■■□□□ 1.1
NUP188Q5SRE5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AC098614.1-201ENST00000368528 745 ntBASIC21.91■■□□□ 1.1
NUP188Q5SRE5 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AC092552.1-201ENST00000547243 906 ntBASIC21.91■■□□□ 1.1
NUP188Q5SRE5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 MIR4515-201ENST00000584082 81 ntBASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AC007967.4-201ENST00000614700 386 ntBASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.91■■□□□ 1.1
NUP188Q5SRE5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 REXO1L6P-201ENST00000603433 1515 ntBASIC21.9■■□□□ 1.1
NUP188Q5SRE5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 RN7SL837P-201ENST00000463010 287 ntBASIC21.9■■□□□ 1.1
NUP188Q5SRE5 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 LINC01451-201ENST00000623792 534 ntBASIC21.9■■□□□ 1.1
NUP188Q5SRE5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 AC135050.7-201ENST00000624508 2218 ntBASIC21.9■■□□□ 1.1
NUP188Q5SRE5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUP188Q5SRE5 LYSMD4-203ENST00000378904 2122 ntBASIC21.89■■□□□ 1.1
NUP188Q5SRE5 HMGA1P7-201ENST00000406908 502 ntBASIC21.89■■□□□ 1.1
NUP188Q5SRE5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.89■■□□□ 1.1
NUP188Q5SRE5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.89■■□□□ 1.09
NUP188Q5SRE5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms