Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 HMGA1P7-201ENST00000406908 502 ntBASIC20.99■□□□□ 0.95
CCDC93Q567U6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.99■□□□□ 0.95
CCDC93Q567U6 CRB3P1-201ENST00000449338 276 ntBASIC20.99■□□□□ 0.95
CCDC93Q567U6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 AC069120.2-201ENST00000524091 540 ntBASIC20.99■□□□□ 0.95
CCDC93Q567U6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC93Q567U6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC93Q567U6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC93Q567U6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC93Q567U6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC93Q567U6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC93Q567U6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 MIR6080-201ENST00000617359 66 ntBASIC20.98■□□□□ 0.95
CCDC93Q567U6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC93Q567U6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC93Q567U6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC93Q567U6 WIZP1-201ENST00000531444 2299 ntBASIC20.98■□□□□ 0.95
CCDC93Q567U6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 AC097493.3-201ENST00000509725 367 ntBASIC20.97■□□□□ 0.95
CCDC93Q567U6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 AL009183.1-201ENST00000603760 355 ntBASIC20.97■□□□□ 0.95
CCDC93Q567U6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 AC120498.9-201ENST00000339021 3867 ntBASIC20.97■□□□□ 0.95
CCDC93Q567U6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC93Q567U6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC93Q567U6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 AC007274.1-201ENST00000439805 662 ntBASIC20.96■□□□□ 0.95
CCDC93Q567U6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 AL358472.5-202ENST00000641448 1267 ntBASIC20.96■□□□□ 0.95
CCDC93Q567U6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC93Q567U6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC93Q567U6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms