Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.95■□□□□ 0.3
CDKL1Q00532 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 LINC02012-201ENST00000608206 1725 ntBASIC16.94■□□□□ 0.3
CDKL1Q00532 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDKL1Q00532 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL1Q00532 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL1Q00532 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDKL1Q00532 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKL1Q00532 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL1Q00532 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKL1Q00532 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.94■□□□□ 0.3
CDKL1Q00532 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL1Q00532 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKL1Q00532 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.94■□□□□ 0.3
CDKL1Q00532 AC099336.1-202ENST00000602961 463 ntBASIC16.94■□□□□ 0.3
CDKL1Q00532 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDKL1Q00532 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.94■□□□□ 0.3
CDKL1Q00532 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.94■□□□□ 0.3
CDKL1Q00532 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDKL1Q00532 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDKL1Q00532 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDKL1Q00532 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDKL1Q00532 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.93■□□□□ 0.3
CDKL1Q00532 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.93■□□□□ 0.3
CDKL1Q00532 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.93■□□□□ 0.3
CDKL1Q00532 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.93■□□□□ 0.3
CDKL1Q00532 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.93■□□□□ 0.3
CDKL1Q00532 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.93■□□□□ 0.3
CDKL1Q00532 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 AL135999.2-201ENST00000622438 1686 ntBASIC16.93■□□□□ 0.3
CDKL1Q00532 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDKL1Q00532 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKL1Q00532 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL1Q00532 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
CDKL1Q00532 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL1Q00532 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDKL1Q00532 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL1Q00532 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CDKL1Q00532 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.92■□□□□ 0.3
CDKL1Q00532 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL1Q00532 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms