Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.85■□□□□ 0.29
CDK3Q00526 AC007064.4-201ENST00000637740 555 ntBASIC16.85■□□□□ 0.29
CDK3Q00526 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK3Q00526 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDK3Q00526 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDK3Q00526 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDK3Q00526 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.85■□□□□ 0.29
CDK3Q00526 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDK3Q00526 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDK3Q00526 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDK3Q00526 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 UPF3AP3-201ENST00000420996 769 ntBASIC16.84■□□□□ 0.29
CDK3Q00526 MCCD1P2-201ENST00000423228 335 ntBASIC16.84■□□□□ 0.29
CDK3Q00526 PDPK2P-202ENST00000562415 1191 ntBASIC16.84■□□□□ 0.29
CDK3Q00526 MTDHP5-201ENST00000598980 586 ntBASIC16.84■□□□□ 0.29
CDK3Q00526 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK3Q00526 GPALPP1-207ENST00000611650 899 ntBASIC16.84■□□□□ 0.29
CDK3Q00526 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK3Q00526 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDK3Q00526 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDK3Q00526 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK3Q00526 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK3Q00526 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDK3Q00526 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDK3Q00526 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDK3Q00526 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CDK3Q00526 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK3Q00526 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 RPSAP43-201ENST00000402237 625 ntBASIC16.83■□□□□ 0.28
CDK3Q00526 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDK3Q00526 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK3Q00526 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK3Q00526 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK3Q00526 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK3Q00526 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK3Q00526 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK3Q00526 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.83■□□□□ 0.28
CDK3Q00526 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.83■□□□□ 0.28
CDK3Q00526 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK3Q00526 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 AC025580.3-201ENST00000617932 1424 ntBASIC16.83■□□□□ 0.28
CDK3Q00526 AC139530.3-201ENST00000620344 690 ntBASIC16.83■□□□□ 0.28
CDK3Q00526 REXO1L3P-201ENST00000622202 1288 ntBASIC16.83■□□□□ 0.28
CDK3Q00526 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK3Q00526 AC141586.5-201ENST00000624546 2050 ntBASIC16.83■□□□□ 0.28
CDK3Q00526 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDK3Q00526 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDK3Q00526 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK3Q00526 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK3Q00526 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK3Q00526 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDK3Q00526 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK3Q00526 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDK3Q00526 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CDK3Q00526 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK3Q00526 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK3Q00526 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK3Q00526 FRMD8P1-201ENST00000440433 1524 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms