Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NKX6-1P78426 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.2■□□□□ 0.02
NKX6-1P78426 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-1P78426 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX6-1P78426 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX6-1P78426 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX6-1P78426 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX6-1P78426 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.19■□□□□ 0.02
NKX6-1P78426 AC004832.2-201ENST00000426397 482 ntBASIC15.19■□□□□ 0.02
NKX6-1P78426 AC007967.2-201ENST00000432613 625 ntBASIC15.19■□□□□ 0.02
NKX6-1P78426 SLC25A6P5-201ENST00000435663 894 ntBASIC15.19■□□□□ 0.02
NKX6-1P78426 UNC93B6-202ENST00000528242 690 ntBASIC15.19■□□□□ 0.02
NKX6-1P78426 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX6-1P78426 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX6-1P78426 AC025062.2-201ENST00000605477 670 ntBASIC15.19■□□□□ 0.02
NKX6-1P78426 AL139288.1-201ENST00000623748 933 ntBASIC15.19■□□□□ 0.02
NKX6-1P78426 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
NKX6-1P78426 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
NKX6-1P78426 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NKX6-1P78426 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NKX6-1P78426 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX6-1P78426 PMPCAP1-201ENST00000508114 1576 ntBASIC15.19■□□□□ 0.02
NKX6-1P78426 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX6-1P78426 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX6-1P78426 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
NKX6-1P78426 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX6-1P78426 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NKX6-1P78426 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.18■□□□□ 0.02
NKX6-1P78426 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NKX6-1P78426 DNAJB3-202ENST00000449667 1266 ntBASIC15.18■□□□□ 0.02
NKX6-1P78426 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.18■□□□□ 0.02
NKX6-1P78426 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.18■□□□□ 0.02
NKX6-1P78426 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.18■□□□□ 0.02
NKX6-1P78426 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.18■□□□□ 0.02
NKX6-1P78426 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 MTDHP5-201ENST00000598980 586 ntBASIC15.18■□□□□ 0.02
NKX6-1P78426 MTDHP4-201ENST00000600287 670 ntBASIC15.18■□□□□ 0.02
NKX6-1P78426 AC019129.2-201ENST00000609837 1235 ntBASIC15.18■□□□□ 0.02
NKX6-1P78426 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX6-1P78426 AL049757.1-201ENST00000616842 1596 ntBASIC15.18■□□□□ 0.02
NKX6-1P78426 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX6-1P78426 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NKX6-1P78426 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-1P78426 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.17■□□□□ 0.02
NKX6-1P78426 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.17■□□□□ 0.02
NKX6-1P78426 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NKX6-1P78426 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms