Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.2□□□□□ -0.46
RPL39P62891 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
RPL39P62891 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.2□□□□□ -0.46
RPL39P62891 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.2□□□□□ -0.46
RPL39P62891 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.2□□□□□ -0.46
RPL39P62891 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 AP000525.1-201ENST00000608286 694 ntBASIC12.2□□□□□ -0.46
RPL39P62891 AC010653.2-201ENST00000623505 997 ntBASIC12.2□□□□□ -0.46
RPL39P62891 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RPL39P62891 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.2□□□□□ -0.46
RPL39P62891 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPL39P62891 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.2□□□□□ -0.46
RPL39P62891 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RPL39P62891 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.19□□□□□ -0.46
RPL39P62891 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.19□□□□□ -0.46
RPL39P62891 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 AC012618.2-201ENST00000428058 849 ntBASIC12.19□□□□□ -0.46
RPL39P62891 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.19□□□□□ -0.46
RPL39P62891 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 CD99P1-205ENST00000527459 561 ntBASIC12.19□□□□□ -0.46
RPL39P62891 C2orf69P3-201ENST00000565542 1120 ntBASIC12.19□□□□□ -0.46
RPL39P62891 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.19□□□□□ -0.46
RPL39P62891 AC233702.5-201ENST00000584107 538 ntBASIC12.19□□□□□ -0.46
RPL39P62891 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.19□□□□□ -0.46
RPL39P62891 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 AC024563.2-201ENST00000603282 481 ntBASIC12.19□□□□□ -0.46
RPL39P62891 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPL39P62891 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 AC103702.1-201ENST00000548801 2630 ntBASIC12.19□□□□□ -0.46
RPL39P62891 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 KRT8P9-201ENST00000558927 1449 ntBASIC12.19□□□□□ -0.46
RPL39P62891 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPL39P62891 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.19□□□□□ -0.46
RPL39P62891 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RPL39P62891 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RPL39P62891 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RPL39P62891 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.18□□□□□ -0.46
RPL39P62891 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPL39P62891 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPL39P62891 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RPL39P62891 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.18□□□□□ -0.46
RPL39P62891 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RPL39P62891 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms