Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PEX3P56589 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 LINC02012-201ENST00000608206 1725 ntBASIC18.91■□□□□ 0.62
PEX3P56589 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PEX3P56589 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.91■□□□□ 0.62
PEX3P56589 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.91■□□□□ 0.62
PEX3P56589 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.91■□□□□ 0.62
PEX3P56589 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PEX3P56589 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PEX3P56589 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PEX3P56589 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 PKD1P1-201ENST00000458669 6805 ntBASIC18.91■□□□□ 0.62
PEX3P56589 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PEX3P56589 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PEX3P56589 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.9■□□□□ 0.62
PEX3P56589 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PEX3P56589 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.9■□□□□ 0.62
PEX3P56589 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PEX3P56589 PAWRP1-201ENST00000451083 565 ntBASIC18.9■□□□□ 0.62
PEX3P56589 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.9■□□□□ 0.62
PEX3P56589 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PEX3P56589 AC034105.1-201ENST00000563488 319 ntBASIC18.9■□□□□ 0.62
PEX3P56589 AC106730.1-201ENST00000566722 1090 ntBASIC18.9■□□□□ 0.62
PEX3P56589 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.9■□□□□ 0.62
PEX3P56589 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.9■□□□□ 0.62
PEX3P56589 GGTLC5P-201ENST00000617623 998 ntBASIC18.9■□□□□ 0.62
PEX3P56589 AC004790.2-201ENST00000623588 572 ntBASIC18.9■□□□□ 0.62
PEX3P56589 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PEX3P56589 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PEX3P56589 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.9■□□□□ 0.62
PEX3P56589 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.9■□□□□ 0.62
PEX3P56589 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PEX3P56589 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 AC092053.1-201ENST00000605787 1936 ntBASIC18.9■□□□□ 0.62
PEX3P56589 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PEX3P56589 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.9■□□□□ 0.62
PEX3P56589 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PEX3P56589 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
PEX3P56589 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PEX3P56589 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.89■□□□□ 0.62
PEX3P56589 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PEX3P56589 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PEX3P56589 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PEX3P56589 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PEX3P56589 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 AC012313.1-201ENST00000593393 3059 ntBASIC18.89■□□□□ 0.61
PEX3P56589 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PEX3P56589 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.89■□□□□ 0.61
PEX3P56589 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.89■□□□□ 0.61
PEX3P56589 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.89■□□□□ 0.61
PEX3P56589 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.89■□□□□ 0.61
PEX3P56589 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.89■□□□□ 0.61
PEX3P56589 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.89■□□□□ 0.61
PEX3P56589 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PEX3P56589 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
PEX3P56589 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PEX3P56589 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms