Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH12P55289 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.06■□□□□ 0.16
CDH12P55289 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH12P55289 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH12P55289 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH12P55289 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH12P55289 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH12P55289 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH12P55289 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDH12P55289 AC092068.3-201ENST00000587894 2016 ntBASIC16.06■□□□□ 0.16
CDH12P55289 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH12P55289 AC078925.2-201ENST00000624013 1973 ntBASIC16.06■□□□□ 0.16
CDH12P55289 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH12P55289 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 AC092171.3-201ENST00000610122 2651 ntBASIC16.05■□□□□ 0.16
CDH12P55289 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDH12P55289 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDH12P55289 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH12P55289 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH12P55289 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 RN7SL606P-201ENST00000472779 293 ntBASIC16.05■□□□□ 0.16
CDH12P55289 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH12P55289 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.05■□□□□ 0.16
CDH12P55289 AC011498.5-201ENST00000592027 486 ntBASIC16.05■□□□□ 0.16
CDH12P55289 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.05■□□□□ 0.16
CDH12P55289 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH12P55289 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 AC008741.2-201ENST00000612792 3115 ntBASIC16.05■□□□□ 0.16
CDH12P55289 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH12P55289 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH12P55289 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH12P55289 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH12P55289 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH12P55289 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH12P55289 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH12P55289 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH12P55289 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH12P55289 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CDH12P55289 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH12P55289 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH12P55289 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH12P55289 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.04■□□□□ 0.16
CDH12P55289 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CDH12P55289 AC124864.1-201ENST00000623408 392 ntBASIC16.04■□□□□ 0.16
CDH12P55289 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH12P55289 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH12P55289 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH12P55289 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH12P55289 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH12P55289 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH12P55289 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms