Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.42■□□□□ 0.54
VCPP55072 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.42■□□□□ 0.54
VCPP55072 AL139288.1-201ENST00000623748 933 ntBASIC18.42■□□□□ 0.54
VCPP55072 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCPP55072 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.42■□□□□ 0.54
VCPP55072 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.42■□□□□ 0.54
VCPP55072 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCPP55072 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
VCPP55072 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCPP55072 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.42■□□□□ 0.54
VCPP55072 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCPP55072 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.42■□□□□ 0.54
VCPP55072 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.42■□□□□ 0.54
VCPP55072 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.42■□□□□ 0.54
VCPP55072 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCPP55072 CROCCP2-202ENST00000412962 2773 ntBASIC18.42■□□□□ 0.54
VCPP55072 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VCPP55072 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
VCPP55072 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.41■□□□□ 0.54
VCPP55072 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.41■□□□□ 0.54
VCPP55072 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.41■□□□□ 0.54
VCPP55072 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
VCPP55072 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.41■□□□□ 0.54
VCPP55072 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.41■□□□□ 0.54
VCPP55072 DDX43P3-201ENST00000441064 443 ntBASIC18.41■□□□□ 0.54
VCPP55072 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.41■□□□□ 0.54
VCPP55072 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
VCPP55072 NKAPP1-205ENST00000585790 367 ntBASIC18.41■□□□□ 0.54
VCPP55072 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.41■□□□□ 0.54
VCPP55072 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VCPP55072 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.41■□□□□ 0.54
VCPP55072 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VCPP55072 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCPP55072 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.41■□□□□ 0.54
VCPP55072 AC012313.1-201ENST00000593393 3059 ntBASIC18.41■□□□□ 0.54
VCPP55072 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.4■□□□□ 0.54
VCPP55072 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VCPP55072 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.4■□□□□ 0.54
VCPP55072 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.4■□□□□ 0.54
VCPP55072 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VCPP55072 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.4■□□□□ 0.54
VCPP55072 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.4■□□□□ 0.54
VCPP55072 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.4■□□□□ 0.54
VCPP55072 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.4■□□□□ 0.54
VCPP55072 AL096865.1-201ENST00000606796 927 ntBASIC18.4■□□□□ 0.54
VCPP55072 LINC01451-201ENST00000623792 534 ntBASIC18.4■□□□□ 0.54
VCPP55072 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.4■□□□□ 0.54
VCPP55072 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VCPP55072 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.4■□□□□ 0.54
VCPP55072 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VCPP55072 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VCPP55072 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCPP55072 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.39■□□□□ 0.54
VCPP55072 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
VCPP55072 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
VCPP55072 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
VCPP55072 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.39■□□□□ 0.53
VCPP55072 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCPP55072 AC007967.3-201ENST00000434308 558 ntBASIC18.39■□□□□ 0.53
VCPP55072 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.39■□□□□ 0.53
VCPP55072 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.39■□□□□ 0.53
VCPP55072 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.39■□□□□ 0.53
VCPP55072 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
VCPP55072 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.39■□□□□ 0.53
VCPP55072 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.39■□□□□ 0.53
VCPP55072 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms