Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
EPHB4P54760 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
EPHB4P54760 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
EPHB4P54760 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
EPHB4P54760 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
EPHB4P54760 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 FAM58CP-201ENST00000435741 640 ntBASIC19.32■□□□□ 0.68
EPHB4P54760 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.32■□□□□ 0.68
EPHB4P54760 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.32■□□□□ 0.68
EPHB4P54760 MIR4745-201ENST00000577608 62 ntBASIC19.32■□□□□ 0.68
EPHB4P54760 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.32■□□□□ 0.68
EPHB4P54760 REXO1L9P-201ENST00000604264 2108 ntBASIC19.32■□□□□ 0.68
EPHB4P54760 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.32■□□□□ 0.68
EPHB4P54760 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.32■□□□□ 0.68
EPHB4P54760 AC124067.4-201ENST00000519691 2379 ntBASIC19.32■□□□□ 0.68
EPHB4P54760 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EPHB4P54760 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
EPHB4P54760 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.31■□□□□ 0.68
EPHB4P54760 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 AC080080.1-201ENST00000625121 2420 ntBASIC19.31■□□□□ 0.68
EPHB4P54760 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
EPHB4P54760 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
EPHB4P54760 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.31■□□□□ 0.68
EPHB4P54760 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 KRT19P2-202ENST00000557173 1012 ntBASIC19.31■□□□□ 0.68
EPHB4P54760 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EPHB4P54760 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHB4P54760 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
EPHB4P54760 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.31■□□□□ 0.68
EPHB4P54760 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHB4P54760 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
EPHB4P54760 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 BCAR1-209ENST00000546196 1340 ntBASIC19.3■□□□□ 0.68
EPHB4P54760 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
EPHB4P54760 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHB4P54760 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 AC096633.1-201ENST00000422446 749 ntBASIC19.3■□□□□ 0.68
EPHB4P54760 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.3■□□□□ 0.68
EPHB4P54760 AC109322.1-201ENST00000524499 1264 ntBASIC19.3■□□□□ 0.68
EPHB4P54760 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHB4P54760 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
EPHB4P54760 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHB4P54760 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.3■□□□□ 0.68
EPHB4P54760 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.3■□□□□ 0.68
EPHB4P54760 AL513210.1-201ENST00000629608 234 ntBASIC19.3■□□□□ 0.68
EPHB4P54760 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHB4P54760 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
EPHB4P54760 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
EPHB4P54760 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.3■□□□□ 0.68
EPHB4P54760 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 AC132938.6-201ENST00000623828 1655 ntBASIC19.3■□□□□ 0.68
EPHB4P54760 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.3■□□□□ 0.68
EPHB4P54760 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EPHB4P54760 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms