Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACLYP53396 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.78■□□□□ 0.6
ACLYP53396 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.78■□□□□ 0.6
ACLYP53396 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.78■□□□□ 0.6
ACLYP53396 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.78■□□□□ 0.6
ACLYP53396 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.78■□□□□ 0.6
ACLYP53396 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.78■□□□□ 0.6
ACLYP53396 CR383656.12-201ENST00000549567 513 ntBASIC18.78■□□□□ 0.6
ACLYP53396 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ACLYP53396 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.78■□□□□ 0.6
ACLYP53396 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACLYP53396 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ACLYP53396 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ACLYP53396 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.78■□□□□ 0.6
ACLYP53396 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.78■□□□□ 0.6
ACLYP53396 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACLYP53396 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ACLYP53396 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ACLYP53396 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ACLYP53396 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ACLYP53396 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 SLC22A20-204ENST00000530038 1673 ntBASIC18.77■□□□□ 0.6
ACLYP53396 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ACLYP53396 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.77■□□□□ 0.6
ACLYP53396 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.77■□□□□ 0.6
ACLYP53396 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.77■□□□□ 0.6
ACLYP53396 AC027369.6-201ENST00000525520 931 ntBASIC18.77■□□□□ 0.6
ACLYP53396 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 MIR3909-201ENST00000579518 119 ntBASIC18.77■□□□□ 0.6
ACLYP53396 SPDYE22P-201ENST00000582158 798 ntBASIC18.77■□□□□ 0.6
ACLYP53396 AL662799.1-202ENST00000614205 422 ntBASIC18.77■□□□□ 0.6
ACLYP53396 AC025048.6-201ENST00000634326 1161 ntBASIC18.77■□□□□ 0.6
ACLYP53396 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ACLYP53396 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
ACLYP53396 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ACLYP53396 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ACLYP53396 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACLYP53396 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACLYP53396 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ACLYP53396 AC016027.1-202ENST00000607927 1699 ntBASIC18.76■□□□□ 0.59
ACLYP53396 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
ACLYP53396 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACLYP53396 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACLYP53396 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.76■□□□□ 0.59
ACLYP53396 PIN1P1-201ENST00000412108 996 ntBASIC18.76■□□□□ 0.59
ACLYP53396 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.76■□□□□ 0.59
ACLYP53396 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.76■□□□□ 0.59
ACLYP53396 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.76■□□□□ 0.59
ACLYP53396 AL590560.3-201ENST00000623350 461 ntBASIC18.76■□□□□ 0.59
ACLYP53396 AC073592.8-201ENST00000624126 511 ntBASIC18.76■□□□□ 0.59
ACLYP53396 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.76■□□□□ 0.59
ACLYP53396 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ACLYP53396 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ACLYP53396 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ACLYP53396 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.76■□□□□ 0.59
ACLYP53396 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACLYP53396 AC100757.3-201ENST00000622361 1406 ntBASIC18.75■□□□□ 0.59
ACLYP53396 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ACLYP53396 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACLYP53396 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACLYP53396 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ACLYP53396 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.75■□□□□ 0.59
ACLYP53396 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.75■□□□□ 0.59
ACLYP53396 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.75■□□□□ 0.59
ACLYP53396 MEIS3P1-201ENST00000495167 958 ntBASIC18.75■□□□□ 0.59
ACLYP53396 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.75■□□□□ 0.59
ACLYP53396 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.75■□□□□ 0.59
ACLYP53396 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.75■□□□□ 0.59
ACLYP53396 AL138918.1-201ENST00000568306 659 ntBASIC18.75■□□□□ 0.59
ACLYP53396 AC091167.2-201ENST00000579581 588 ntBASIC18.75■□□□□ 0.59
ACLYP53396 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ACLYP53396 AC009118.2-201ENST00000613275 655 ntBASIC18.75■□□□□ 0.59
ACLYP53396 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.75■□□□□ 0.59
ACLYP53396 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms