Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AF228730.5-201ENST00000530288 346 ntBASIC21.16■□□□□ 0.98
NUP98P52948 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NUP98P52948 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NUP98P52948 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.16■□□□□ 0.98
NUP98P52948 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP98P52948 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP98P52948 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP98P52948 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP98P52948 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP98P52948 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP98P52948 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP98P52948 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP98P52948 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP98P52948 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.15■□□□□ 0.98
NUP98P52948 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.15■□□□□ 0.98
NUP98P52948 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP98P52948 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
NUP98P52948 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
NUP98P52948 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.15■□□□□ 0.98
NUP98P52948 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NUP98P52948 RN7SL204P-201ENST00000582831 262 ntBASIC21.15■□□□□ 0.98
NUP98P52948 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NUP98P52948 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.15■□□□□ 0.98
NUP98P52948 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NUP98P52948 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NUP98P52948 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NUP98P52948 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NUP98P52948 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUP98P52948 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP98P52948 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NUP98P52948 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP98P52948 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NUP98P52948 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.14■□□□□ 0.97
NUP98P52948 TSPY16P-201ENST00000449843 468 ntBASIC21.14■□□□□ 0.97
NUP98P52948 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NUP98P52948 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP98P52948 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP98P52948 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP98P52948 AC097493.3-201ENST00000509725 367 ntBASIC21.14■□□□□ 0.97
NUP98P52948 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.14■□□□□ 0.97
NUP98P52948 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.14■□□□□ 0.97
NUP98P52948 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.14■□□□□ 0.97
NUP98P52948 AC124947.2-201ENST00000547118 1133 ntBASIC21.14■□□□□ 0.97
NUP98P52948 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NUP98P52948 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.14■□□□□ 0.97
NUP98P52948 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.14■□□□□ 0.97
NUP98P52948 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.14■□□□□ 0.97
NUP98P52948 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP98P52948 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.14■□□□□ 0.97
NUP98P52948 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP98P52948 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.14■□□□□ 0.97
NUP98P52948 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP98P52948 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NUP98P52948 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NUP98P52948 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NUP98P52948 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 AC142381.1-201ENST00000426099 345 ntBASIC21.13■□□□□ 0.97
NUP98P52948 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.13■□□□□ 0.97
NUP98P52948 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP98P52948 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NUP98P52948 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.13■□□□□ 0.97
NUP98P52948 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP98P52948 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP98P52948 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.13■□□□□ 0.97
NUP98P52948 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP98P52948 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.13■□□□□ 0.97
NUP98P52948 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.13■□□□□ 0.97
NUP98P52948 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.13■□□□□ 0.97
NUP98P52948 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.13■□□□□ 0.97
NUP98P52948 AC008761.3-201ENST00000624803 892 ntBASIC21.13■□□□□ 0.97
NUP98P52948 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP98P52948 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP98P52948 TOP3BP1-201ENST00000420768 1380 ntBASIC21.13■□□□□ 0.97
NUP98P52948 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NUP98P52948 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NUP98P52948 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP98P52948 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NUP98P52948 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms