Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLK1P49759 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.22■□□□□ 0.19
CLK1P49759 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.22■□□□□ 0.19
CLK1P49759 RNF126P1-202ENST00000569893 925 ntBASIC16.22■□□□□ 0.19
CLK1P49759 AC090616.6-201ENST00000582640 721 ntBASIC16.22■□□□□ 0.19
CLK1P49759 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.22■□□□□ 0.19
CLK1P49759 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLK1P49759 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK1P49759 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK1P49759 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLK1P49759 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLK1P49759 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK1P49759 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CLK1P49759 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.22■□□□□ 0.19
CLK1P49759 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.22■□□□□ 0.19
CLK1P49759 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLK1P49759 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLK1P49759 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK1P49759 AC005332.1-201ENST00000577698 1310 ntBASIC16.21■□□□□ 0.19
CLK1P49759 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK1P49759 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 AL596257.1-201ENST00000641463 2694 ntBASIC16.21■□□□□ 0.19
CLK1P49759 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 MIR1224-201ENST00000408193 85 ntBASIC16.21■□□□□ 0.19
CLK1P49759 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLK1P49759 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.21■□□□□ 0.19
CLK1P49759 TSPY22P-201ENST00000427496 604 ntBASIC16.21■□□□□ 0.19
CLK1P49759 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK1P49759 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK1P49759 KRT8P26-201ENST00000534154 1276 ntBASIC16.21■□□□□ 0.19
CLK1P49759 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK1P49759 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK1P49759 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK1P49759 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLK1P49759 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK1P49759 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 AC010331.1-201ENST00000611423 582 ntBASIC16.21■□□□□ 0.19
CLK1P49759 AC116407.2-201ENST00000613639 860 ntBASIC16.21■□□□□ 0.19
CLK1P49759 AC116407.4-201ENST00000623319 1061 ntBASIC16.21■□□□□ 0.19
CLK1P49759 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK1P49759 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK1P49759 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK1P49759 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.21■□□□□ 0.18
CLK1P49759 AC133963.1-201ENST00000504166 1679 ntBASIC16.21■□□□□ 0.18
CLK1P49759 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLK1P49759 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK1P49759 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLK1P49759 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK1P49759 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CLK1P49759 FLJ38576-201ENST00000623820 2459 ntBASIC16.2■□□□□ 0.18
CLK1P49759 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK1P49759 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.2■□□□□ 0.18
CLK1P49759 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.2■□□□□ 0.18
CLK1P49759 AGGF1P2-201ENST00000426656 2106 ntBASIC16.2■□□□□ 0.18
CLK1P49759 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK1P49759 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK1P49759 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.2■□□□□ 0.18
CLK1P49759 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK1P49759 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.2■□□□□ 0.18
CLK1P49759 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.2■□□□□ 0.18
CLK1P49759 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.2■□□□□ 0.18
CLK1P49759 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.2■□□□□ 0.18
CLK1P49759 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK1P49759 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms