Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CENPFP49454 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.15■□□□□ 0.66
CENPFP49454 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CENPFP49454 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.15■□□□□ 0.66
CENPFP49454 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CENPFP49454 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.15■□□□□ 0.66
CENPFP49454 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.15■□□□□ 0.66
CENPFP49454 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 AL391825.1-201ENST00000457671 1364 ntBASIC19.15■□□□□ 0.66
CENPFP49454 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CENPFP49454 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPFP49454 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.15■□□□□ 0.66
CENPFP49454 SPDYE18-201ENST00000510091 1050 ntBASIC19.15■□□□□ 0.66
CENPFP49454 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CENPFP49454 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CENPFP49454 AP3S2-216ENST00000617003 1561 ntBASIC19.15■□□□□ 0.66
CENPFP49454 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CENPFP49454 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CENPFP49454 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CENPFP49454 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CENPFP49454 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CENPFP49454 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CENPFP49454 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CENPFP49454 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.14■□□□□ 0.66
CENPFP49454 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.14■□□□□ 0.66
CENPFP49454 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CENPFP49454 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.14■□□□□ 0.65
CENPFP49454 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.14■□□□□ 0.65
CENPFP49454 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.14■□□□□ 0.65
CENPFP49454 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.14■□□□□ 0.65
CENPFP49454 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.14■□□□□ 0.65
CENPFP49454 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CENPFP49454 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
CENPFP49454 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.14■□□□□ 0.65
CENPFP49454 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.13■□□□□ 0.65
CENPFP49454 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.13■□□□□ 0.65
CENPFP49454 DUTP2-201ENST00000519164 463 ntBASIC19.13■□□□□ 0.65
CENPFP49454 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.13■□□□□ 0.65
CENPFP49454 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.13■□□□□ 0.65
CENPFP49454 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CENPFP49454 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.13■□□□□ 0.65
CENPFP49454 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CENPFP49454 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.13■□□□□ 0.65
CENPFP49454 AC092658.1-201ENST00000505836 891 ntBASIC19.13■□□□□ 0.65
CENPFP49454 AC008738.7-201ENST00000609744 511 ntBASIC19.13■□□□□ 0.65
CENPFP49454 AL109936.8-201ENST00000641772 604 ntBASIC19.13■□□□□ 0.65
CENPFP49454 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.13■□□□□ 0.65
CENPFP49454 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CENPFP49454 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CENPFP49454 HMGA1P7-201ENST00000406908 502 ntBASIC19.12■□□□□ 0.65
CENPFP49454 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CENPFP49454 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CENPFP49454 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms