Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.23■□□□□ 0.35
ARCN1P48444 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ARCN1P48444 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.23■□□□□ 0.35
ARCN1P48444 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.23■□□□□ 0.35
ARCN1P48444 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.23■□□□□ 0.35
ARCN1P48444 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.23■□□□□ 0.35
ARCN1P48444 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.23■□□□□ 0.35
ARCN1P48444 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.23■□□□□ 0.35
ARCN1P48444 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARCN1P48444 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ARCN1P48444 RNF216P1-203ENST00000404404 2427 ntBASIC17.22■□□□□ 0.35
ARCN1P48444 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.22■□□□□ 0.35
ARCN1P48444 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
ARCN1P48444 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ARCN1P48444 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.22■□□□□ 0.35
ARCN1P48444 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.22■□□□□ 0.35
ARCN1P48444 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ARCN1P48444 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ARCN1P48444 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 AL031008.1-201ENST00000619963 541 ntBASIC17.22■□□□□ 0.35
ARCN1P48444 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ARCN1P48444 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ARCN1P48444 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARCN1P48444 AP005117.1-201ENST00000584346 1413 ntBASIC17.21■□□□□ 0.35
ARCN1P48444 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
ARCN1P48444 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.21■□□□□ 0.35
ARCN1P48444 AC078925.2-201ENST00000624013 1973 ntBASIC17.21■□□□□ 0.35
ARCN1P48444 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ARCN1P48444 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 AC026396.1-201ENST00000419388 421 ntBASIC17.21■□□□□ 0.35
ARCN1P48444 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.21■□□□□ 0.35
ARCN1P48444 AC132008.2-207ENST00000454517 770 ntBASIC17.21■□□□□ 0.35
ARCN1P48444 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.21■□□□□ 0.35
ARCN1P48444 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.21■□□□□ 0.35
ARCN1P48444 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.21■□□□□ 0.35
ARCN1P48444 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.21■□□□□ 0.35
ARCN1P48444 AP001269.4-201ENST00000609611 512 ntBASIC17.21■□□□□ 0.35
ARCN1P48444 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.21■□□□□ 0.35
ARCN1P48444 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ARCN1P48444 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
ARCN1P48444 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.21■□□□□ 0.35
ARCN1P48444 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARCN1P48444 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.21■□□□□ 0.35
ARCN1P48444 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
ARCN1P48444 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARCN1P48444 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARCN1P48444 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARCN1P48444 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.2■□□□□ 0.34
ARCN1P48444 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ARCN1P48444 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.2■□□□□ 0.34
ARCN1P48444 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.2■□□□□ 0.34
ARCN1P48444 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.2■□□□□ 0.34
ARCN1P48444 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
ARCN1P48444 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ARCN1P48444 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.2■□□□□ 0.34
ARCN1P48444 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.2■□□□□ 0.34
ARCN1P48444 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ARCN1P48444 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ARCN1P48444 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms