Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
TM4SF4P48230 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.35■□□□□ 0.69
TM4SF4P48230 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.35■□□□□ 0.69
TM4SF4P48230 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TM4SF4P48230 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.35■□□□□ 0.69
TM4SF4P48230 REXO1L6P-201ENST00000603433 1515 ntBASIC19.35■□□□□ 0.69
TM4SF4P48230 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF4P48230 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF4P48230 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.34■□□□□ 0.69
TM4SF4P48230 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
TM4SF4P48230 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.34■□□□□ 0.69
TM4SF4P48230 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF4P48230 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF4P48230 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF4P48230 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TM4SF4P48230 FAM86MP-201ENST00000340703 885 ntBASIC19.34■□□□□ 0.69
TM4SF4P48230 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.34■□□□□ 0.69
TM4SF4P48230 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF4P48230 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.34■□□□□ 0.69
TM4SF4P48230 AC092552.1-201ENST00000547243 906 ntBASIC19.34■□□□□ 0.69
TM4SF4P48230 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 AC004790.1-201ENST00000612686 536 ntBASIC19.34■□□□□ 0.69
TM4SF4P48230 SPTSSB-204ENST00000617024 1292 ntBASIC19.34■□□□□ 0.69
TM4SF4P48230 COX11-210ENST00000639671 696 ntBASIC19.34■□□□□ 0.69
TM4SF4P48230 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.34■□□□□ 0.69
TM4SF4P48230 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF4P48230 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 AL133338.1-201ENST00000565695 1517 ntBASIC19.34■□□□□ 0.69
TM4SF4P48230 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF4P48230 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF4P48230 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.33■□□□□ 0.69
TM4SF4P48230 SLC7A15P-201ENST00000424028 1363 ntBASIC19.33■□□□□ 0.69
TM4SF4P48230 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF4P48230 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
TM4SF4P48230 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.33■□□□□ 0.69
TM4SF4P48230 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
TM4SF4P48230 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.33■□□□□ 0.69
TM4SF4P48230 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TM4SF4P48230 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.33■□□□□ 0.69
TM4SF4P48230 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.33■□□□□ 0.69
TM4SF4P48230 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF4P48230 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.33■□□□□ 0.68
TM4SF4P48230 TTTY23B-201ENST00000442790 549 ntBASIC19.33■□□□□ 0.68
TM4SF4P48230 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.33■□□□□ 0.68
TM4SF4P48230 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.33■□□□□ 0.68
TM4SF4P48230 BANF1P1-201ENST00000553684 263 ntBASIC19.33■□□□□ 0.68
TM4SF4P48230 AL079307.3-201ENST00000556114 283 ntBASIC19.33■□□□□ 0.68
TM4SF4P48230 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF4P48230 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF4P48230 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF4P48230 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TM4SF4P48230 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF4P48230 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF4P48230 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.33■□□□□ 0.68
TM4SF4P48230 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF4P48230 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF4P48230 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF4P48230 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF4P48230 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TM4SF4P48230 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF4P48230 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.32■□□□□ 0.68
TM4SF4P48230 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.32■□□□□ 0.68
TM4SF4P48230 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 AC131009.4-201ENST00000624048 1740 ntBASIC19.32■□□□□ 0.68
TM4SF4P48230 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.32■□□□□ 0.68
TM4SF4P48230 AL080243.2-201ENST00000418783 582 ntBASIC19.32■□□□□ 0.68
TM4SF4P48230 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.32■□□□□ 0.68
TM4SF4P48230 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms