Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC6A12P48065 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SLC6A12P48065 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC6A12P48065 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC6A12P48065 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC6A12P48065 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A12P48065 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC6A12P48065 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC6A12P48065 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC6A12P48065 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC6A12P48065 AC099398.1-201ENST00000567919 2776 ntBASIC16.55■□□□□ 0.24
SLC6A12P48065 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A12P48065 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A12P48065 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A12P48065 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A12P48065 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A12P48065 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC6A12P48065 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.54■□□□□ 0.24
SLC6A12P48065 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC6A12P48065 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SLC6A12P48065 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 AC084018.2-201ENST00000613093 2607 ntBASIC16.54■□□□□ 0.24
SLC6A12P48065 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A12P48065 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A12P48065 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A12P48065 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A12P48065 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms