Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SSR1P43307 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SSR1P43307 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR1P43307 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR1P43307 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR1P43307 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SSR1P43307 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR1P43307 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR1P43307 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR1P43307 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.33■□□□□ 0.53
SSR1P43307 AL162727.3-201ENST00000635661 2787 ntBASIC18.33■□□□□ 0.53
SSR1P43307 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.33■□□□□ 0.53
SSR1P43307 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SSR1P43307 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR1P43307 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SSR1P43307 MYCLP1-201ENST00000372451 1075 ntBASIC18.33■□□□□ 0.52
SSR1P43307 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SSR1P43307 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 AC111152.3-201ENST00000569699 673 ntBASIC18.33■□□□□ 0.52
SSR1P43307 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 AL590326.2-201ENST00000625139 305 ntBASIC18.33■□□□□ 0.52
SSR1P43307 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SSR1P43307 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.33■□□□□ 0.52
SSR1P43307 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.33■□□□□ 0.52
SSR1P43307 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SSR1P43307 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR1P43307 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.32■□□□□ 0.52
SSR1P43307 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SSR1P43307 AC016734.2-201ENST00000624325 1377 ntBASIC18.32■□□□□ 0.52
SSR1P43307 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SSR1P43307 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 FAM220CP-201ENST00000395253 831 ntBASIC18.32■□□□□ 0.52
SSR1P43307 PCED1CP-201ENST00000419887 785 ntBASIC18.32■□□□□ 0.52
SSR1P43307 AC091607.1-201ENST00000490318 1060 ntBASIC18.32■□□□□ 0.52
SSR1P43307 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.32■□□□□ 0.52
SSR1P43307 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SSR1P43307 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 AL138831.2-201ENST00000606564 490 ntBASIC18.32■□□□□ 0.52
SSR1P43307 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.32■□□□□ 0.52
SSR1P43307 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.32■□□□□ 0.52
SSR1P43307 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.32■□□□□ 0.52
SSR1P43307 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SSR1P43307 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.32■□□□□ 0.52
SSR1P43307 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR1P43307 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR1P43307 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSR1P43307 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR1P43307 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR1P43307 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR1P43307 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSR1P43307 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
SSR1P43307 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.31■□□□□ 0.52
SSR1P43307 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR1P43307 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.31■□□□□ 0.52
SSR1P43307 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.31■□□□□ 0.52
SSR1P43307 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.31■□□□□ 0.52
SSR1P43307 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSR1P43307 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SSR1P43307 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.31■□□□□ 0.52
SSR1P43307 AC019129.2-201ENST00000609837 1235 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms