Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN6P29350 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.33■□□□□ 0.2
PTPN6P29350 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN6P29350 AL135999.2-201ENST00000622438 1686 ntBASIC16.33■□□□□ 0.2
PTPN6P29350 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN6P29350 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN6P29350 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN6P29350 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PTPN6P29350 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PTPN6P29350 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PTPN6P29350 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PTPN6P29350 FAM220CP-201ENST00000395253 831 ntBASIC16.32■□□□□ 0.2
PTPN6P29350 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 AL450487.1-201ENST00000426799 995 ntBASIC16.32■□□□□ 0.2
PTPN6P29350 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN6P29350 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN6P29350 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN6P29350 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN6P29350 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
PTPN6P29350 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN6P29350 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN6P29350 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN6P29350 AC099336.1-202ENST00000602961 463 ntBASIC16.32■□□□□ 0.2
PTPN6P29350 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN6P29350 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN6P29350 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPN6P29350 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN6P29350 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN6P29350 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PTPN6P29350 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PTPN6P29350 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 AC009336.1-201ENST00000608941 1553 ntBASIC16.31■□□□□ 0.2
PTPN6P29350 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 FRMD8P1-201ENST00000440433 1524 ntBASIC16.31■□□□□ 0.2
PTPN6P29350 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PTPN6P29350 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN6P29350 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN6P29350 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN6P29350 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN6P29350 MINOS1P3-201ENST00000457048 203 ntBASIC16.31■□□□□ 0.2
PTPN6P29350 FOSL1P1-201ENST00000511041 816 ntBASIC16.31■□□□□ 0.2
PTPN6P29350 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPN6P29350 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN6P29350 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPN6P29350 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PTPN6P29350 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PTPN6P29350 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 AC132938.5-201ENST00000624980 1813 ntBASIC16.31■□□□□ 0.2
PTPN6P29350 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPN6P29350 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
PTPN6P29350 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPN6P29350 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN6P29350 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN6P29350 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PTPN6P29350 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPN6P29350 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPN6P29350 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN6P29350 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPN6P29350 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms