Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
GDF1P27539 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GDF1P27539 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.58■□□□□ 0.08
GDF1P27539 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
GDF1P27539 FZD10-202ENST00000539839 3282 ntBASIC15.58■□□□□ 0.08
GDF1P27539 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 AL138688.1-201ENST00000624851 1594 ntBASIC15.58■□□□□ 0.08
GDF1P27539 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GDF1P27539 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.57■□□□□ 0.08
GDF1P27539 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
GDF1P27539 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
GDF1P27539 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.57■□□□□ 0.08
GDF1P27539 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.57■□□□□ 0.08
GDF1P27539 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.57■□□□□ 0.08
GDF1P27539 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GDF1P27539 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.57■□□□□ 0.08
GDF1P27539 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
GDF1P27539 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 AC067852.2-201ENST00000590513 2313 ntBASIC15.56■□□□□ 0.08
GDF1P27539 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 AC023274.1-201ENST00000418278 595 ntBASIC15.56■□□□□ 0.08
GDF1P27539 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 HCG4B-203ENST00000450128 991 ntBASIC15.56■□□□□ 0.08
GDF1P27539 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.56■□□□□ 0.08
GDF1P27539 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.56■□□□□ 0.08
GDF1P27539 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 AC002347.1-201ENST00000569543 541 ntBASIC15.56■□□□□ 0.08
GDF1P27539 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 AC016396.2-201ENST00000562575 1417 ntBASIC15.56■□□□□ 0.08
GDF1P27539 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
GDF1P27539 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
GDF1P27539 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GDF1P27539 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
GDF1P27539 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms