Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC104692.2-201ENST00000603054 253 ntBASIC16.96■□□□□ 0.31
VARSP26640 AC019129.2-201ENST00000609837 1235 ntBASIC16.96■□□□□ 0.31
VARSP26640 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VARSP26640 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.96■□□□□ 0.31
VARSP26640 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARSP26640 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VARSP26640 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.96■□□□□ 0.3
VARSP26640 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
VARSP26640 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.96■□□□□ 0.3
VARSP26640 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.96■□□□□ 0.3
VARSP26640 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VARSP26640 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.96■□□□□ 0.3
VARSP26640 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VARSP26640 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VARSP26640 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VARSP26640 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.96■□□□□ 0.3
VARSP26640 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VARSP26640 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VARSP26640 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.95■□□□□ 0.3
VARSP26640 UBALD1-205ENST00000590891 2641 ntBASIC16.95■□□□□ 0.3
VARSP26640 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.95■□□□□ 0.3
VARSP26640 TP73-AS1-210ENST00000637775 1455 ntBASIC16.95■□□□□ 0.3
VARSP26640 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 FAM220CP-201ENST00000395253 831 ntBASIC16.95■□□□□ 0.3
VARSP26640 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VARSP26640 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.95■□□□□ 0.3
VARSP26640 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.95■□□□□ 0.3
VARSP26640 AC009533.2-201ENST00000543664 586 ntBASIC16.95■□□□□ 0.3
VARSP26640 AC109462.3-201ENST00000573934 613 ntBASIC16.95■□□□□ 0.3
VARSP26640 BNIP3P18-201ENST00000593976 575 ntBASIC16.95■□□□□ 0.3
VARSP26640 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VARSP26640 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VARSP26640 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.95■□□□□ 0.3
VARSP26640 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.95■□□□□ 0.3
VARSP26640 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.95■□□□□ 0.3
VARSP26640 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.95■□□□□ 0.3
VARSP26640 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.95■□□□□ 0.3
VARSP26640 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARSP26640 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.94■□□□□ 0.3
VARSP26640 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.94■□□□□ 0.3
VARSP26640 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.94■□□□□ 0.3
VARSP26640 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
VARSP26640 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.94■□□□□ 0.3
VARSP26640 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VARSP26640 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VARSP26640 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.94■□□□□ 0.3
VARSP26640 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VARSP26640 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
VARSP26640 AP000347.1-202ENST00000435868 847 ntBASIC16.94■□□□□ 0.3
VARSP26640 AC096582.2-201ENST00000510860 516 ntBASIC16.94■□□□□ 0.3
VARSP26640 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.94■□□□□ 0.3
VARSP26640 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.94■□□□□ 0.3
VARSP26640 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.94■□□□□ 0.3
VARSP26640 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.94■□□□□ 0.3
VARSP26640 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.94■□□□□ 0.3
VARSP26640 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VARSP26640 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARSP26640 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms