Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SYN1P17600 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SYN1P17600 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SYN1P17600 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SYN1P17600 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.52■□□□□ 0.55
SYN1P17600 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SYN1P17600 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.51■□□□□ 0.55
SYN1P17600 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.51■□□□□ 0.55
SYN1P17600 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
SYN1P17600 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.51■□□□□ 0.55
SYN1P17600 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.51■□□□□ 0.55
SYN1P17600 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SYN1P17600 MIR4538-201ENST00000581377 78 ntBASIC18.51■□□□□ 0.55
SYN1P17600 AL512343.1-201ENST00000605837 169 ntBASIC18.51■□□□□ 0.55
SYN1P17600 AL844908.2-201ENST00000609461 460 ntBASIC18.51■□□□□ 0.55
SYN1P17600 GPR182-203ENST00000622922 591 ntBASIC18.51■□□□□ 0.55
SYN1P17600 AC068587.10-201ENST00000641210 219 ntBASIC18.51■□□□□ 0.55
SYN1P17600 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.51■□□□□ 0.55
SYN1P17600 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.51■□□□□ 0.55
SYN1P17600 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.51■□□□□ 0.55
SYN1P17600 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SYN1P17600 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SYN1P17600 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYN1P17600 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
SYN1P17600 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SYN1P17600 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
SYN1P17600 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.5■□□□□ 0.55
SYN1P17600 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.5■□□□□ 0.55
SYN1P17600 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.5■□□□□ 0.55
SYN1P17600 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.5■□□□□ 0.55
SYN1P17600 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.5■□□□□ 0.55
SYN1P17600 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.5■□□□□ 0.55
SYN1P17600 AC135586.1-201ENST00000539323 574 ntBASIC18.5■□□□□ 0.55
SYN1P17600 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.5■□□□□ 0.55
SYN1P17600 AL031055.1-201ENST00000606362 631 ntBASIC18.5■□□□□ 0.55
SYN1P17600 TEX28P1-201ENST00000613479 1221 ntBASIC18.5■□□□□ 0.55
SYN1P17600 TEX28P2-201ENST00000617764 1221 ntBASIC18.5■□□□□ 0.55
SYN1P17600 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
SYN1P17600 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.5■□□□□ 0.55
SYN1P17600 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.5■□□□□ 0.55
SYN1P17600 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.5■□□□□ 0.55
SYN1P17600 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYN1P17600 AC087499.5-201ENST00000452760 1342 ntBASIC18.49■□□□□ 0.55
SYN1P17600 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SYN1P17600 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.49■□□□□ 0.55
SYN1P17600 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SYN1P17600 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 AL020996.1-203ENST00000536896 2307 ntBASIC18.49■□□□□ 0.55
SYN1P17600 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.49■□□□□ 0.55
SYN1P17600 DFFBP1-201ENST00000433250 979 ntBASIC18.49■□□□□ 0.55
SYN1P17600 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.49■□□□□ 0.55
SYN1P17600 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.49■□□□□ 0.55
SYN1P17600 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.49■□□□□ 0.55
SYN1P17600 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYN1P17600 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.49■□□□□ 0.55
SYN1P17600 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SYN1P17600 AL031598.1-201ENST00000561511 1773 ntBASIC18.49■□□□□ 0.55
SYN1P17600 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms