Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CYP3A4P08684 YBX2P1-201ENST00000394192 760 ntBASIC19.23■□□□□ 0.67
CYP3A4P08684 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.23■□□□□ 0.67
CYP3A4P08684 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CYP3A4P08684 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.23■□□□□ 0.67
CYP3A4P08684 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.23■□□□□ 0.67
CYP3A4P08684 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.23■□□□□ 0.67
CYP3A4P08684 PDPK2P-202ENST00000562415 1191 ntBASIC19.23■□□□□ 0.67
CYP3A4P08684 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.23■□□□□ 0.67
CYP3A4P08684 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CYP3A4P08684 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.23■□□□□ 0.67
CYP3A4P08684 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CYP3A4P08684 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CYP3A4P08684 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CYP3A4P08684 AL353732.1-201ENST00000569618 1459 ntBASIC19.22■□□□□ 0.67
CYP3A4P08684 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.22■□□□□ 0.67
CYP3A4P08684 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.22■□□□□ 0.67
CYP3A4P08684 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.22■□□□□ 0.67
CYP3A4P08684 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.22■□□□□ 0.67
CYP3A4P08684 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.22■□□□□ 0.67
CYP3A4P08684 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 AL513480.1-201ENST00000451731 511 ntBASIC19.22■□□□□ 0.67
CYP3A4P08684 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.22■□□□□ 0.67
CYP3A4P08684 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.22■□□□□ 0.67
CYP3A4P08684 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CYP3A4P08684 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.22■□□□□ 0.67
CYP3A4P08684 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.22■□□□□ 0.67
CYP3A4P08684 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.22■□□□□ 0.67
CYP3A4P08684 AC091167.2-201ENST00000579581 588 ntBASIC19.22■□□□□ 0.67
CYP3A4P08684 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.22■□□□□ 0.67
CYP3A4P08684 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.22■□□□□ 0.67
CYP3A4P08684 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.22■□□□□ 0.67
CYP3A4P08684 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.22■□□□□ 0.67
CYP3A4P08684 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.22■□□□□ 0.67
CYP3A4P08684 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CYP3A4P08684 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CYP3A4P08684 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.21■□□□□ 0.67
CYP3A4P08684 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CYP3A4P08684 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CYP3A4P08684 FZD10-202ENST00000539839 3282 ntBASIC19.21■□□□□ 0.67
CYP3A4P08684 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 BX842568.4-201ENST00000421222 227 ntBASIC19.21■□□□□ 0.67
CYP3A4P08684 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.21■□□□□ 0.67
CYP3A4P08684 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.21■□□□□ 0.67
CYP3A4P08684 MIR4515-201ENST00000584082 81 ntBASIC19.21■□□□□ 0.67
CYP3A4P08684 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.21■□□□□ 0.67
CYP3A4P08684 AL645728.2-201ENST00000641974 660 ntBASIC19.21■□□□□ 0.67
CYP3A4P08684 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 TUBB8P12-201ENST00000308911 1335 ntBASIC19.21■□□□□ 0.67
CYP3A4P08684 TUBB7P-202ENST00000428444 1305 ntBASIC19.21■□□□□ 0.67
CYP3A4P08684 TUBB8P7-204ENST00000567960 1332 ntBASIC19.21■□□□□ 0.67
CYP3A4P08684 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CYP3A4P08684 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CYP3A4P08684 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.21■□□□□ 0.67
CYP3A4P08684 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.21■□□□□ 0.67
CYP3A4P08684 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.2■□□□□ 0.66
CYP3A4P08684 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CYP3A4P08684 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CYP3A4P08684 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CYP3A4P08684 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms