Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
APOA4P06727 AC046185.3-201ENST00000623228 1824 ntBASIC17.26■□□□□ 0.35
APOA4P06727 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.26■□□□□ 0.35
APOA4P06727 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
APOA4P06727 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.26■□□□□ 0.35
APOA4P06727 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.26■□□□□ 0.35
APOA4P06727 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.26■□□□□ 0.35
APOA4P06727 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.26■□□□□ 0.35
APOA4P06727 PRELID1P1-202ENST00000567272 903 ntBASIC17.26■□□□□ 0.35
APOA4P06727 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.26■□□□□ 0.35
APOA4P06727 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOA4P06727 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
APOA4P06727 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
APOA4P06727 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
APOA4P06727 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
APOA4P06727 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
APOA4P06727 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
APOA4P06727 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.25■□□□□ 0.35
APOA4P06727 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.25■□□□□ 0.35
APOA4P06727 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 AL049757.1-201ENST00000616842 1596 ntBASIC17.25■□□□□ 0.35
APOA4P06727 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 SLC25A1P3-201ENST00000395415 828 ntBASIC17.25■□□□□ 0.35
APOA4P06727 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
APOA4P06727 FOSL1P1-201ENST00000511041 816 ntBASIC17.25■□□□□ 0.35
APOA4P06727 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.25■□□□□ 0.35
APOA4P06727 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.25■□□□□ 0.35
APOA4P06727 MIR5100-201ENST00000579544 119 ntBASIC17.25■□□□□ 0.35
APOA4P06727 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.25■□□□□ 0.35
APOA4P06727 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.25■□□□□ 0.35
APOA4P06727 AL121772.3-201ENST00000610840 674 ntBASIC17.25■□□□□ 0.35
APOA4P06727 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
APOA4P06727 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
APOA4P06727 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.25■□□□□ 0.35
APOA4P06727 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.25■□□□□ 0.35
APOA4P06727 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.25■□□□□ 0.35
APOA4P06727 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
APOA4P06727 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
APOA4P06727 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOA4P06727 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 TNRC18P3-201ENST00000441896 2691 ntBASIC17.24■□□□□ 0.35
APOA4P06727 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APOA4P06727 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.24■□□□□ 0.35
APOA4P06727 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.24■□□□□ 0.35
APOA4P06727 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.24■□□□□ 0.35
APOA4P06727 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.24■□□□□ 0.35
APOA4P06727 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
APOA4P06727 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 AL591684.3-201ENST00000605187 298 ntBASIC17.24■□□□□ 0.35
APOA4P06727 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
APOA4P06727 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOA4P06727 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms