Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HOMER2P1-201ENST00000455653 964 ntBASIC15.61■□□□□ 0.09
HMGN1P05114 YBX1P2-201ENST00000489612 999 ntBASIC15.61■□□□□ 0.09
HMGN1P05114 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HMGN1P05114 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGN1P05114 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.61■□□□□ 0.09
HMGN1P05114 AC010203.1-204ENST00000548782 407 ntBASIC15.61■□□□□ 0.09
HMGN1P05114 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGN1P05114 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGN1P05114 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.61■□□□□ 0.09
HMGN1P05114 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGN1P05114 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HMGN1P05114 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HMGN1P05114 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGN1P05114 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGN1P05114 RNF216P1-203ENST00000404404 2427 ntBASIC15.6■□□□□ 0.09
HMGN1P05114 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGN1P05114 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGN1P05114 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HMGN1P05114 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGN1P05114 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
HMGN1P05114 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HMGN1P05114 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 AC068418.2-201ENST00000577309 3703 ntBASIC15.6■□□□□ 0.09
HMGN1P05114 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HMGN1P05114 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 GUSBP12-201ENST00000513727 720 ntBASIC15.6■□□□□ 0.09
HMGN1P05114 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGN1P05114 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGN1P05114 AC139887.4-201ENST00000607877 719 ntBASIC15.6■□□□□ 0.09
HMGN1P05114 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGN1P05114 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HMGN1P05114 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGN1P05114 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HMGN1P05114 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
HMGN1P05114 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGN1P05114 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
HMGN1P05114 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HMGN1P05114 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 Z83836.1-201ENST00000624605 1642 ntBASIC15.59■□□□□ 0.09
HMGN1P05114 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 AC087499.1-201ENST00000418141 1075 ntBASIC15.59■□□□□ 0.09
HMGN1P05114 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 AP002490.2-201ENST00000524791 560 ntBASIC15.59■□□□□ 0.09
HMGN1P05114 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGN1P05114 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.59■□□□□ 0.09
HMGN1P05114 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
HMGN1P05114 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGN1P05114 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
HMGN1P05114 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGN1P05114 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms