Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL1A1P02452 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL1A1P02452 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL1A1P02452 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.5■□□□□ 0.87
COL1A1P02452 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.5■□□□□ 0.87
COL1A1P02452 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL1A1P02452 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.5■□□□□ 0.87
COL1A1P02452 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.5■□□□□ 0.87
COL1A1P02452 TOP3BP1-201ENST00000420768 1380 ntBASIC20.5■□□□□ 0.87
COL1A1P02452 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 RNU1-129P-201ENST00000384064 167 ntBASIC20.5■□□□□ 0.87
COL1A1P02452 RN7SL589P-201ENST00000481268 310 ntBASIC20.5■□□□□ 0.87
COL1A1P02452 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL1A1P02452 U1.21-201ENST00000580816 167 ntBASIC20.5■□□□□ 0.87
COL1A1P02452 AC026120.1-201ENST00000611536 926 ntBASIC20.5■□□□□ 0.87
COL1A1P02452 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A1P02452 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A1P02452 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL1A1P02452 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.49■□□□□ 0.87
COL1A1P02452 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A1P02452 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL1A1P02452 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A1P02452 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL1A1P02452 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL1A1P02452 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.49■□□□□ 0.87
COL1A1P02452 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A1P02452 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.49■□□□□ 0.87
COL1A1P02452 CNN2P2-201ENST00000443536 909 ntBASIC20.49■□□□□ 0.87
COL1A1P02452 CNN2P3-201ENST00000450201 906 ntBASIC20.49■□□□□ 0.87
COL1A1P02452 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL1A1P02452 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.49■□□□□ 0.87
COL1A1P02452 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.49■□□□□ 0.87
COL1A1P02452 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL1A1P02452 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.49■□□□□ 0.87
COL1A1P02452 AC091167.2-201ENST00000579581 588 ntBASIC20.49■□□□□ 0.87
COL1A1P02452 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.49■□□□□ 0.87
COL1A1P02452 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.49■□□□□ 0.87
COL1A1P02452 AL136317.3-201ENST00000618497 906 ntBASIC20.49■□□□□ 0.87
COL1A1P02452 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL1A1P02452 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.49■□□□□ 0.87
COL1A1P02452 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 AC012569.1-201ENST00000591191 1524 ntBASIC20.48■□□□□ 0.87
COL1A1P02452 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.48■□□□□ 0.87
COL1A1P02452 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.48■□□□□ 0.87
COL1A1P02452 AC092053.1-201ENST00000605787 1936 ntBASIC20.48■□□□□ 0.87
COL1A1P02452 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.48■□□□□ 0.87
COL1A1P02452 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.48■□□□□ 0.87
COL1A1P02452 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 AC069335.1-201ENST00000489972 472 ntBASIC20.48■□□□□ 0.87
COL1A1P02452 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 FAM86C2P-203ENST00000528684 1004 ntBASIC20.48■□□□□ 0.87
COL1A1P02452 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.48■□□□□ 0.87
COL1A1P02452 RARRES2P8-201ENST00000566335 367 ntBASIC20.48■□□□□ 0.87
COL1A1P02452 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.48■□□□□ 0.87
COL1A1P02452 AL390955.2-201ENST00000603032 514 ntBASIC20.48■□□□□ 0.87
COL1A1P02452 Z92544.3-201ENST00000624747 417 ntBASIC20.48■□□□□ 0.87
COL1A1P02452 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COL1A1P02452 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.48■□□□□ 0.87
COL1A1P02452 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL1A1P02452 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.47■□□□□ 0.87
COL1A1P02452 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.47■□□□□ 0.87
COL1A1P02452 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
COL1A1P02452 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A1P02452 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms