Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.25■□□□□ 0.67
GGPS1O95749 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.25■□□□□ 0.67
GGPS1O95749 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 LTB4R2-202ENST00000528054 3092 ntBASIC19.25■□□□□ 0.67
GGPS1O95749 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.25■□□□□ 0.67
GGPS1O95749 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GGPS1O95749 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
GGPS1O95749 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GGPS1O95749 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GGPS1O95749 AC129492.6-201ENST00000611383 1305 ntBASIC19.25■□□□□ 0.67
GGPS1O95749 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.24■□□□□ 0.67
GGPS1O95749 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GGPS1O95749 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GGPS1O95749 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.24■□□□□ 0.67
GGPS1O95749 CNN2P11-201ENST00000429351 262 ntBASIC19.24■□□□□ 0.67
GGPS1O95749 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.24■□□□□ 0.67
GGPS1O95749 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.24■□□□□ 0.67
GGPS1O95749 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.24■□□□□ 0.67
GGPS1O95749 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.24■□□□□ 0.67
GGPS1O95749 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.24■□□□□ 0.67
GGPS1O95749 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.24■□□□□ 0.67
GGPS1O95749 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GGPS1O95749 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.24■□□□□ 0.67
GGPS1O95749 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GGPS1O95749 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.23■□□□□ 0.67
GGPS1O95749 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.23■□□□□ 0.67
GGPS1O95749 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GGPS1O95749 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.23■□□□□ 0.67
GGPS1O95749 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GGPS1O95749 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.23■□□□□ 0.67
GGPS1O95749 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GGPS1O95749 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.23■□□□□ 0.67
GGPS1O95749 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 KRT18P28-201ENST00000453838 1332 ntBASIC19.23■□□□□ 0.67
GGPS1O95749 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GGPS1O95749 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.22■□□□□ 0.67
GGPS1O95749 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.22■□□□□ 0.67
GGPS1O95749 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.22■□□□□ 0.67
GGPS1O95749 AC092919.2-201ENST00000623631 1645 ntBASIC19.22■□□□□ 0.67
GGPS1O95749 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GGPS1O95749 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.22■□□□□ 0.67
GGPS1O95749 METTL21AP1-201ENST00000438852 635 ntBASIC19.22■□□□□ 0.67
GGPS1O95749 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.22■□□□□ 0.67
GGPS1O95749 AC107918.2-201ENST00000530817 355 ntBASIC19.22■□□□□ 0.67
GGPS1O95749 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.22■□□□□ 0.67
GGPS1O95749 AC092902.6-201ENST00000641783 218 ntBASIC19.22■□□□□ 0.67
GGPS1O95749 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.22■□□□□ 0.67
GGPS1O95749 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GGPS1O95749 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms