Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 AL353593.2-201ENST00000602529 1483 ntBASIC15.56■□□□□ 0.08
PPP1R3DO95685 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 AC009336.1-201ENST00000608941 1553 ntBASIC15.56■□□□□ 0.08
PPP1R3DO95685 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP1R3DO95685 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PPP1R3DO95685 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 AC018695.7-201ENST00000624587 2492 ntBASIC15.55■□□□□ 0.08
PPP1R3DO95685 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 VENTXP7-201ENST00000475503 772 ntBASIC15.55■□□□□ 0.08
PPP1R3DO95685 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.55■□□□□ 0.08
PPP1R3DO95685 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPP1R3DO95685 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 AC092171.3-201ENST00000610122 2651 ntBASIC15.54■□□□□ 0.08
PPP1R3DO95685 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 MIR1224-201ENST00000408193 85 ntBASIC15.54■□□□□ 0.08
PPP1R3DO95685 KLF4P1-201ENST00000412782 1185 ntBASIC15.54■□□□□ 0.08
PPP1R3DO95685 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 AC246785.2-201ENST00000432512 513 ntBASIC15.54■□□□□ 0.08
PPP1R3DO95685 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PPP1R3DO95685 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PPP1R3DO95685 AC009533.2-201ENST00000543664 586 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms