Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX3O95343 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 FRMD8P1-201ENST00000440433 1524 ntBASIC16.82■□□□□ 0.28
SIX3O95343 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SIX3O95343 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.82■□□□□ 0.28
SIX3O95343 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 AC074051.2-201ENST00000565115 352 ntBASIC16.82■□□□□ 0.28
SIX3O95343 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 MIR3180-1-201ENST00000580374 94 ntBASIC16.82■□□□□ 0.28
SIX3O95343 MIR3180-3-201ENST00000584616 94 ntBASIC16.82■□□□□ 0.28
SIX3O95343 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.82■□□□□ 0.28
SIX3O95343 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.82■□□□□ 0.28
SIX3O95343 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX3O95343 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SIX3O95343 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
SIX3O95343 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX3O95343 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 PMPCAP1-201ENST00000508114 1576 ntBASIC16.81■□□□□ 0.28
SIX3O95343 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SIX3O95343 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX3O95343 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX3O95343 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SIX3O95343 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX3O95343 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.81■□□□□ 0.28
SIX3O95343 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.81■□□□□ 0.28
SIX3O95343 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.81■□□□□ 0.28
SIX3O95343 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.81■□□□□ 0.28
SIX3O95343 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 AC018695.7-201ENST00000624587 2492 ntBASIC16.81■□□□□ 0.28
SIX3O95343 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX3O95343 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX3O95343 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SIX3O95343 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX3O95343 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SIX3O95343 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SIX3O95343 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SIX3O95343 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.8■□□□□ 0.28
SIX3O95343 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SIX3O95343 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.8■□□□□ 0.28
SIX3O95343 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.8■□□□□ 0.28
SIX3O95343 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX3O95343 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.8■□□□□ 0.28
SIX3O95343 AP000867.3-201ENST00000524675 377 ntBASIC16.8■□□□□ 0.28
SIX3O95343 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms