Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
TRIM3O75382 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM3O75382 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.09■□□□□ 0.17
TRIM3O75382 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
TRIM3O75382 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM3O75382 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
TRIM3O75382 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM3O75382 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM3O75382 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM3O75382 PMPCAP1-201ENST00000508114 1576 ntBASIC16.09■□□□□ 0.17
TRIM3O75382 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRIM3O75382 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM3O75382 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM3O75382 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.08■□□□□ 0.17
TRIM3O75382 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM3O75382 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRIM3O75382 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TRIM3O75382 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM3O75382 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
TRIM3O75382 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM3O75382 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.08■□□□□ 0.16
TRIM3O75382 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM3O75382 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM3O75382 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRIM3O75382 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM3O75382 SLC25A6P4-201ENST00000586535 553 ntBASIC16.08■□□□□ 0.16
TRIM3O75382 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM3O75382 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM3O75382 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM3O75382 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM3O75382 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRIM3O75382 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM3O75382 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM3O75382 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM3O75382 MRPL3P1-201ENST00000400109 1033 ntBASIC16.07■□□□□ 0.16
TRIM3O75382 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM3O75382 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM3O75382 FAM197Y8-203ENST00000450145 560 ntBASIC16.07■□□□□ 0.16
TRIM3O75382 SCARNA2-201ENST00000458748 420 ntBASIC16.07■□□□□ 0.16
TRIM3O75382 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM3O75382 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM3O75382 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 AL662844.1-201ENST00000546340 181 ntBASIC16.07■□□□□ 0.16
TRIM3O75382 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM3O75382 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM3O75382 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM3O75382 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM3O75382 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 AL049757.1-201ENST00000616842 1596 ntBASIC16.07■□□□□ 0.16
TRIM3O75382 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM3O75382 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms