Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE3O75131 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE3O75131 AC007967.2-201ENST00000432613 625 ntBASIC16.55■□□□□ 0.24
CPNE3O75131 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.55■□□□□ 0.24
CPNE3O75131 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CPNE3O75131 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE3O75131 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE3O75131 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CPNE3O75131 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE3O75131 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 AC009336.1-201ENST00000608941 1553 ntBASIC16.55■□□□□ 0.24
CPNE3O75131 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE3O75131 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CPNE3O75131 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE3O75131 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE3O75131 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.54■□□□□ 0.24
CPNE3O75131 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE3O75131 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CPNE3O75131 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.54■□□□□ 0.24
CPNE3O75131 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.54■□□□□ 0.24
CPNE3O75131 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.54■□□□□ 0.24
CPNE3O75131 AL139424.1-201ENST00000607572 797 ntBASIC16.54■□□□□ 0.24
CPNE3O75131 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CPNE3O75131 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE3O75131 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPNE3O75131 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CPNE3O75131 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.54■□□□□ 0.24
CPNE3O75131 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE3O75131 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE3O75131 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 AC006504.4-201ENST00000592118 1568 ntBASIC16.53■□□□□ 0.24
CPNE3O75131 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE3O75131 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CPNE3O75131 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CPNE3O75131 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.53■□□□□ 0.24
CPNE3O75131 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE3O75131 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE3O75131 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE3O75131 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.53■□□□□ 0.24
CPNE3O75131 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.53■□□□□ 0.24
CPNE3O75131 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE3O75131 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CPNE3O75131 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms