Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DUX4L1-201ENST00000627662 1275 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 DUX4L8-201ENST00000629013 1275 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 DUX4L3-201ENST00000630187 1275 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 DUX4L7-201ENST00000630678 1275 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 DUX4L5-201ENST00000630834 1275 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 PPT1-215ENST00000641471 2368 ntBASIC15.35■□□□□ 0.05
PFDN1O60925 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.35■□□□□ 0.05
PFDN1O60925 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PFDN1O60925 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PFDN1O60925 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PFDN1O60925 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 AC016396.2-201ENST00000562575 1417 ntBASIC15.34■□□□□ 0.05
PFDN1O60925 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.34■□□□□ 0.05
PFDN1O60925 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.34■□□□□ 0.05
PFDN1O60925 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PFDN1O60925 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.34■□□□□ 0.05
PFDN1O60925 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.34■□□□□ 0.05
PFDN1O60925 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.34■□□□□ 0.05
PFDN1O60925 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PFDN1O60925 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.34■□□□□ 0.05
PFDN1O60925 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PFDN1O60925 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.34■□□□□ 0.05
PFDN1O60925 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PFDN1O60925 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PFDN1O60925 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PFDN1O60925 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
PFDN1O60925 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PFDN1O60925 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PFDN1O60925 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.33■□□□□ 0.05
PFDN1O60925 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PFDN1O60925 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PFDN1O60925 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PFDN1O60925 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
PFDN1O60925 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.33■□□□□ 0.05
PFDN1O60925 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
PFDN1O60925 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.33■□□□□ 0.04
PFDN1O60925 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.33■□□□□ 0.04
PFDN1O60925 AL512631.2-201ENST00000604634 923 ntBASIC15.33■□□□□ 0.04
PFDN1O60925 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.33■□□□□ 0.04
PFDN1O60925 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.33■□□□□ 0.04
PFDN1O60925 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PFDN1O60925 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PFDN1O60925 CR383656.2-201ENST00000548656 2254 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms