Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.51■□□□□ 0.23
GFRA3O60609 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GFRA3O60609 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GFRA3O60609 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.51■□□□□ 0.23
GFRA3O60609 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.51■□□□□ 0.23
GFRA3O60609 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.51■□□□□ 0.23
GFRA3O60609 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.51■□□□□ 0.23
GFRA3O60609 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.51■□□□□ 0.23
GFRA3O60609 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.51■□□□□ 0.23
GFRA3O60609 RN7SL618P-201ENST00000477850 296 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.51■□□□□ 0.23
GFRA3O60609 AC105233.2-201ENST00000523697 349 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 AF228730.5-201ENST00000530288 346 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.51■□□□□ 0.23
GFRA3O60609 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.51■□□□□ 0.23
GFRA3O60609 AC016629.1-201ENST00000596579 586 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.51■□□□□ 0.23
GFRA3O60609 AL365330.1-201ENST00000607459 531 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.51■□□□□ 0.23
GFRA3O60609 AL589935.2-201ENST00000616471 1231 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 AC015967.2-201ENST00000624092 234 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 AC006435.4-201ENST00000625037 234 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 AL356737.1-201ENST00000634391 234 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.51■□□□□ 0.23
GFRA3O60609 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.51■□□□□ 0.23
GFRA3O60609 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFRA3O60609 AC018665.1-201ENST00000622927 1362 ntBASIC16.51■□□□□ 0.23
GFRA3O60609 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 PDIA3P1-201ENST00000471856 1510 ntBASIC16.5■□□□□ 0.23
GFRA3O60609 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.5■□□□□ 0.23
GFRA3O60609 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
GFRA3O60609 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.5■□□□□ 0.23
GFRA3O60609 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.5■□□□□ 0.23
GFRA3O60609 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.5■□□□□ 0.23
GFRA3O60609 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.5■□□□□ 0.23
GFRA3O60609 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.5■□□□□ 0.23
GFRA3O60609 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.5■□□□□ 0.23
GFRA3O60609 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
GFRA3O60609 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.5■□□□□ 0.23
GFRA3O60609 SPDYE18-201ENST00000510091 1050 ntBASIC16.5■□□□□ 0.23
GFRA3O60609 TPRX2P-201ENST00000535362 881 ntBASIC16.5■□□□□ 0.23
GFRA3O60609 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.5■□□□□ 0.23
GFRA3O60609 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.5■□□□□ 0.23
GFRA3O60609 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.5■□□□□ 0.23
GFRA3O60609 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.5■□□□□ 0.23
GFRA3O60609 RN7SL828P-201ENST00000607615 303 ntBASIC16.5■□□□□ 0.23
GFRA3O60609 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC16.5■□□□□ 0.23
GFRA3O60609 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.5■□□□□ 0.23
GFRA3O60609 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.5■□□□□ 0.23
GFRA3O60609 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
GFRA3O60609 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFRA3O60609 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
GFRA3O60609 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 AC093010.1-201ENST00000473625 1624 ntBASIC16.49■□□□□ 0.23
GFRA3O60609 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
GFRA3O60609 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.49■□□□□ 0.23
GFRA3O60609 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.49■□□□□ 0.23
GFRA3O60609 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.49■□□□□ 0.23
GFRA3O60609 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GFRA3O60609 AC007551.1-201ENST00000457394 519 ntBASIC16.49■□□□□ 0.23
GFRA3O60609 KRT8P13-201ENST00000463294 1010 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms