Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC068472.1-201ENST00000474589 881 ntBASIC15.28■□□□□ 0.04
GMDSO60547 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.28■□□□□ 0.04
GMDSO60547 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.28■□□□□ 0.04
GMDSO60547 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 AL121672.3-201ENST00000608644 468 ntBASIC15.28■□□□□ 0.04
GMDSO60547 AC116407.4-201ENST00000623319 1061 ntBASIC15.28■□□□□ 0.04
GMDSO60547 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GMDSO60547 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.28■□□□□ 0.04
GMDSO60547 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GMDSO60547 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.28■□□□□ 0.04
GMDSO60547 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GMDSO60547 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.27■□□□□ 0.04
GMDSO60547 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.27■□□□□ 0.04
GMDSO60547 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GMDSO60547 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.27■□□□□ 0.04
GMDSO60547 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.27■□□□□ 0.04
GMDSO60547 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 ARMC10P1-201ENST00000313754 855 ntBASIC15.27■□□□□ 0.04
GMDSO60547 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.27■□□□□ 0.04
GMDSO60547 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 PCED1CP-201ENST00000419887 785 ntBASIC15.27■□□□□ 0.04
GMDSO60547 MTCL1P1-201ENST00000446207 792 ntBASIC15.27■□□□□ 0.04
GMDSO60547 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.27■□□□□ 0.04
GMDSO60547 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.27■□□□□ 0.04
GMDSO60547 KRT18P35-201ENST00000510488 1269 ntBASIC15.27■□□□□ 0.04
GMDSO60547 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.27■□□□□ 0.04
GMDSO60547 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.27■□□□□ 0.04
GMDSO60547 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GMDSO60547 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GMDSO60547 AC010331.1-201ENST00000611423 582 ntBASIC15.27■□□□□ 0.04
GMDSO60547 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
GMDSO60547 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GMDSO60547 AC060834.1-201ENST00000443027 2032 ntBASIC15.27■□□□□ 0.03
GMDSO60547 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GMDSO60547 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GMDSO60547 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GMDSO60547 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.27■□□□□ 0.03
GMDSO60547 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GMDSO60547 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GMDSO60547 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.26■□□□□ 0.03
GMDSO60547 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.26■□□□□ 0.03
GMDSO60547 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
GMDSO60547 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GMDSO60547 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.26■□□□□ 0.03
GMDSO60547 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.26■□□□□ 0.03
GMDSO60547 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.26■□□□□ 0.03
GMDSO60547 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.26■□□□□ 0.03
GMDSO60547 IGHV3-41-201ENST00000613121 348 ntBASIC15.26■□□□□ 0.03
GMDSO60547 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GMDSO60547 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.26■□□□□ 0.03
GMDSO60547 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GMDSO60547 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GMDSO60547 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GMDSO60547 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GMDSO60547 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.25■□□□□ 0.03
GMDSO60547 IER3-202ENST00000376377 1350 ntBASIC15.25■□□□□ 0.03
GMDSO60547 LINC00554-201ENST00000564841 3011 ntBASIC15.25■□□□□ 0.03
GMDSO60547 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GMDSO60547 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.25■□□□□ 0.03
GMDSO60547 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GMDSO60547 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
GMDSO60547 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms