Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LCMT2O60294 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.44■□□□□ 0.22
LCMT2O60294 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.44■□□□□ 0.22
LCMT2O60294 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.44■□□□□ 0.22
LCMT2O60294 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.44■□□□□ 0.22
LCMT2O60294 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.44■□□□□ 0.22
LCMT2O60294 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.44■□□□□ 0.22
LCMT2O60294 AL662844.1-201ENST00000546340 181 ntBASIC16.44■□□□□ 0.22
LCMT2O60294 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.44■□□□□ 0.22
LCMT2O60294 AP001005.1-201ENST00000571755 1248 ntBASIC16.44■□□□□ 0.22
LCMT2O60294 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
LCMT2O60294 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.44■□□□□ 0.22
LCMT2O60294 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 AC060834.1-201ENST00000443027 2032 ntBASIC16.44■□□□□ 0.22
LCMT2O60294 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.44■□□□□ 0.22
LCMT2O60294 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LCMT2O60294 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
LCMT2O60294 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LCMT2O60294 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LCMT2O60294 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.44■□□□□ 0.22
LCMT2O60294 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.44■□□□□ 0.22
LCMT2O60294 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.43■□□□□ 0.22
LCMT2O60294 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LCMT2O60294 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.43■□□□□ 0.22
LCMT2O60294 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.43■□□□□ 0.22
LCMT2O60294 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.43■□□□□ 0.22
LCMT2O60294 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.43■□□□□ 0.22
LCMT2O60294 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 AC116407.3-201ENST00000623905 1129 ntBASIC16.43■□□□□ 0.22
LCMT2O60294 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.43■□□□□ 0.22
LCMT2O60294 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LCMT2O60294 FRMD8P1-201ENST00000440433 1524 ntBASIC16.43■□□□□ 0.22
LCMT2O60294 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LCMT2O60294 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.43■□□□□ 0.22
LCMT2O60294 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.43■□□□□ 0.22
LCMT2O60294 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LCMT2O60294 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.42■□□□□ 0.22
LCMT2O60294 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LCMT2O60294 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LCMT2O60294 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.42■□□□□ 0.22
LCMT2O60294 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.42■□□□□ 0.22
LCMT2O60294 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.42■□□□□ 0.22
LCMT2O60294 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 AC092910.1-201ENST00000482027 1129 ntBASIC16.42■□□□□ 0.22
LCMT2O60294 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.42■□□□□ 0.22
LCMT2O60294 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.42■□□□□ 0.22
LCMT2O60294 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.42■□□□□ 0.22
LCMT2O60294 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LCMT2O60294 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LCMT2O60294 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.42■□□□□ 0.22
LCMT2O60294 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LCMT2O60294 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LCMT2O60294 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms