Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.42■□□□□ 0.22
DUX1O43812 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
DUX1O43812 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.42■□□□□ 0.22
DUX1O43812 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.42■□□□□ 0.22
DUX1O43812 AC107918.2-201ENST00000530817 355 ntBASIC16.42■□□□□ 0.22
DUX1O43812 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.42■□□□□ 0.22
DUX1O43812 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DUX1O43812 REXO1L3P-201ENST00000622202 1288 ntBASIC16.42■□□□□ 0.22
DUX1O43812 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.42■□□□□ 0.22
DUX1O43812 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.42■□□□□ 0.22
DUX1O43812 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.42■□□□□ 0.22
DUX1O43812 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUX1O43812 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.42■□□□□ 0.22
DUX1O43812 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
DUX1O43812 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 AC008764.6-201ENST00000595909 2069 ntBASIC16.41■□□□□ 0.22
DUX1O43812 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.41■□□□□ 0.22
DUX1O43812 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 AC002056.1-201ENST00000395613 760 ntBASIC16.41■□□□□ 0.22
DUX1O43812 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.41■□□□□ 0.22
DUX1O43812 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DUX1O43812 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.41■□□□□ 0.22
DUX1O43812 AP002472.1-201ENST00000577490 586 ntBASIC16.41■□□□□ 0.22
DUX1O43812 AC005412.3-201ENST00000580309 715 ntBASIC16.41■□□□□ 0.22
DUX1O43812 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.41■□□□□ 0.22
DUX1O43812 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.41■□□□□ 0.22
DUX1O43812 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.41■□□□□ 0.22
DUX1O43812 AC092902.6-201ENST00000641783 218 ntBASIC16.41■□□□□ 0.22
DUX1O43812 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.41■□□□□ 0.22
DUX1O43812 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DUX1O43812 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DUX1O43812 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUX1O43812 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DUX1O43812 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUX1O43812 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX1O43812 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DUX1O43812 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUX1O43812 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX1O43812 EGFEM1P-202ENST00000431685 1563 ntBASIC16.4■□□□□ 0.22
DUX1O43812 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.4■□□□□ 0.22
DUX1O43812 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUX1O43812 AC016396.2-201ENST00000562575 1417 ntBASIC16.4■□□□□ 0.22
DUX1O43812 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUX1O43812 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUX1O43812 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DUX1O43812 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX1O43812 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.4■□□□□ 0.22
DUX1O43812 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.4■□□□□ 0.22
DUX1O43812 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.4■□□□□ 0.22
DUX1O43812 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.4■□□□□ 0.22
DUX1O43812 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUX1O43812 AC092919.2-201ENST00000623631 1645 ntBASIC16.4■□□□□ 0.22
DUX1O43812 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.4■□□□□ 0.22
DUX1O43812 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DUX1O43812 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
DUX1O43812 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
DUX1O43812 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.39■□□□□ 0.22
DUX1O43812 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
DUX1O43812 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.39■□□□□ 0.21
DUX1O43812 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DUX1O43812 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DUX1O43812 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms