Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.17■■□□□ 1.3
PER1O15534 KRT18P58-201ENST00000527480 1120 ntBASIC23.17■■□□□ 1.3
PER1O15534 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PER1O15534 AC018845.2-201ENST00000568326 409 ntBASIC23.17■■□□□ 1.3
PER1O15534 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.17■■□□□ 1.3
PER1O15534 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.17■■□□□ 1.3
PER1O15534 AC092865.6-201ENST00000642101 219 ntBASIC23.17■■□□□ 1.3
PER1O15534 AC078925.2-201ENST00000624013 1973 ntBASIC23.17■■□□□ 1.3
PER1O15534 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PER1O15534 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PER1O15534 AGGF1P2-201ENST00000426656 2106 ntBASIC23.17■■□□□ 1.3
PER1O15534 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PER1O15534 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.16■■□□□ 1.3
PER1O15534 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PER1O15534 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PER1O15534 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.16■■□□□ 1.3
PER1O15534 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PER1O15534 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
PER1O15534 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC23.16■■□□□ 1.3
PER1O15534 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
PER1O15534 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.16■■□□□ 1.3
PER1O15534 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC23.16■■□□□ 1.3
PER1O15534 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.16■■□□□ 1.3
PER1O15534 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
PER1O15534 POLD2P1-201ENST00000511220 997 ntBASIC23.16■■□□□ 1.3
PER1O15534 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PER1O15534 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC23.16■■□□□ 1.3
PER1O15534 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.16■■□□□ 1.3
PER1O15534 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 PCDHA12-202ENST00000613593 2588 ntBASIC23.16■■□□□ 1.3
PER1O15534 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC23.16■■□□□ 1.3
PER1O15534 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PER1O15534 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PER1O15534 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 LINC00895-201ENST00000629028 1637 ntBASIC23.15■■□□□ 1.3
PER1O15534 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC23.15■■□□□ 1.3
PER1O15534 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC23.15■■□□□ 1.3
PER1O15534 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.15■■□□□ 1.3
PER1O15534 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 HARS-203ENST00000431330 1774 ntTSL 2 BASIC23.15■■□□□ 1.3
PER1O15534 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PER1O15534 AC020916.1-201ENST00000587762 1774 ntBASIC23.15■■□□□ 1.3
PER1O15534 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 ATP6V0CP3-201ENST00000417255 467 ntBASIC23.15■■□□□ 1.3
PER1O15534 MED15P5-201ENST00000423150 992 ntBASIC23.15■■□□□ 1.3
PER1O15534 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.15■■□□□ 1.3
PER1O15534 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PER1O15534 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.15■■□□□ 1.3
PER1O15534 AC013467.2-201ENST00000605472 835 ntBASIC23.15■■□□□ 1.3
PER1O15534 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC23.15■■□□□ 1.3
PER1O15534 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC23.15■■□□□ 1.3
PER1O15534 AC106886.4-201ENST00000623557 2502 ntBASIC23.15■■□□□ 1.3
PER1O15534 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PER1O15534 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC23.14■■□□□ 1.3
PER1O15534 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
PER1O15534 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PER1O15534 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PER1O15534 TUBB8P12-201ENST00000308911 1335 ntBASIC23.14■■□□□ 1.3
PER1O15534 TUBB7P-202ENST00000428444 1305 ntBASIC23.14■■□□□ 1.3
PER1O15534 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC23.14■■□□□ 1.3
PER1O15534 TUBB8P7-204ENST00000567960 1332 ntBASIC23.14■■□□□ 1.3
PER1O15534 PC-204ENST00000524491 1714 ntTSL 2 BASIC23.14■■□□□ 1.3
PER1O15534 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PER1O15534 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC23.14■■□□□ 1.3
PER1O15534 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PER1O15534 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PER1O15534 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC23.14■■□□□ 1.29
PER1O15534 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PER1O15534 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC23.14■■□□□ 1.29
PER1O15534 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
PER1O15534 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PER1O15534 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.14■■□□□ 1.29
PER1O15534 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.14■■□□□ 1.29
PER1O15534 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.14■■□□□ 1.29
PER1O15534 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC23.14■■□□□ 1.29
PER1O15534 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.14■■□□□ 1.29
PER1O15534 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.14■■□□□ 1.29
PER1O15534 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PER1O15534 AC020763.4-201ENST00000623414 4170 ntBASIC23.14■■□□□ 1.29
PER1O15534 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PER1O15534 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PER1O15534 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PER1O15534 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms