Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
FOXN1O15353 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 PIN1P1-201ENST00000412108 996 ntBASIC20.48■□□□□ 0.87
FOXN1O15353 AC004945.1-201ENST00000416738 983 ntBASIC20.48■□□□□ 0.87
FOXN1O15353 ADH5P3-201ENST00000433842 1137 ntBASIC20.48■□□□□ 0.87
FOXN1O15353 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXN1O15353 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.48■□□□□ 0.87
FOXN1O15353 AC125807.1-201ENST00000483097 614 ntBASIC20.48■□□□□ 0.87
FOXN1O15353 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.48■□□□□ 0.87
FOXN1O15353 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.48■□□□□ 0.87
FOXN1O15353 AL512356.2-201ENST00000546955 174 ntBASIC20.48■□□□□ 0.87
FOXN1O15353 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXN1O15353 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.48■□□□□ 0.87
FOXN1O15353 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.48■□□□□ 0.87
FOXN1O15353 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
FOXN1O15353 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.48■□□□□ 0.87
FOXN1O15353 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
FOXN1O15353 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
FOXN1O15353 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.48■□□□□ 0.87
FOXN1O15353 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
FOXN1O15353 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
FOXN1O15353 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
FOXN1O15353 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXN1O15353 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXN1O15353 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
FOXN1O15353 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 CU639417.3-201ENST00000624240 1404 ntBASIC20.47■□□□□ 0.87
FOXN1O15353 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
FOXN1O15353 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
FOXN1O15353 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 AC093010.1-201ENST00000473625 1624 ntBASIC20.47■□□□□ 0.87
FOXN1O15353 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXN1O15353 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 AC007967.3-201ENST00000434308 558 ntBASIC20.47■□□□□ 0.87
FOXN1O15353 AC005237.2-201ENST00000434368 219 ntBASIC20.47■□□□□ 0.87
FOXN1O15353 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.47■□□□□ 0.87
FOXN1O15353 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXN1O15353 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXN1O15353 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.47■□□□□ 0.87
FOXN1O15353 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXN1O15353 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.47■□□□□ 0.87
FOXN1O15353 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.47■□□□□ 0.87
FOXN1O15353 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
FOXN1O15353 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
FOXN1O15353 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXN1O15353 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXN1O15353 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
FOXN1O15353 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXN1O15353 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
FOXN1O15353 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXN1O15353 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXN1O15353 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXN1O15353 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXN1O15353 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
FOXN1O15353 AC069335.1-201ENST00000489972 472 ntBASIC20.46■□□□□ 0.87
FOXN1O15353 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXN1O15353 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.46■□□□□ 0.87
FOXN1O15353 OR7E47P-204ENST00000575924 449 ntBASIC20.46■□□□□ 0.87
FOXN1O15353 AD001527.2-201ENST00000622994 785 ntBASIC20.46■□□□□ 0.87
FOXN1O15353 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
FOXN1O15353 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXN1O15353 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
FOXN1O15353 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
FOXN1O15353 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
FOXN1O15353 LINC00602-201ENST00000629776 2065 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms