Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 AC012569.1-201ENST00000591191 1524 ntBASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 RBPMS2P1-201ENST00000437762 623 ntBASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 KLF2P3-201ENST00000451977 1087 ntBASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 INGX-202ENST00000489074 768 ntBASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.33■□□□□ 0.85
SPDYE2BA6NHP3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.33■□□□□ 0.84
SPDYE2BA6NHP3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
SPDYE2BA6NHP3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SPDYE2BA6NHP3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.33■□□□□ 0.84
SPDYE2BA6NHP3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SPDYE2BA6NHP3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 MIR943-201ENST00000401286 94 ntBASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 AC109635.5-201ENST00000533593 962 ntBASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 AL157762.1-201ENST00000619612 415 ntBASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 AC084121.4-201ENST00000641598 221 ntBASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 AF228730.8-201ENST00000642140 221 ntBASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPDYE2BA6NHP3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AL049829.1-201ENST00000465411 156 ntBASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 KRT8P23-201ENST00000560090 1207 ntBASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDYE2BA6NHP3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPDYE2BA6NHP3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPDYE2BA6NHP3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPDYE2BA6NHP3 BICD1-207ENST00000551848 1962 ntBASIC20.3■□□□□ 0.84
SPDYE2BA6NHP3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SPDYE2BA6NHP3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPDYE2BA6NHP3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPDYE2BA6NHP3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms