Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV5A0A0B4J249 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 AC132872.4-202ENST00000622924 2756 ntBASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 COX5BP2-201ENST00000392354 334 ntBASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 SPDYE15P-201ENST00000424157 909 ntBASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 AL441883.1-201ENST00000566170 1045 ntBASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV5A0A0B4J249 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 AL391005.1-201ENST00000623953 2435 ntBASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 SLC25A3P1-201ENST00000443844 931 ntBASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 ZNF444P1-201ENST00000559497 298 ntBASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 AC109462.3-201ENST00000573934 613 ntBASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV5A0A0B4J249 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms