Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCH2Q9Y6C5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCH2Q9Y6C5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AC008738.7-201ENST00000609744 511 ntBASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AC003101.2-201ENST00000612557 442 ntBASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AC018529.1-201ENST00000613063 361 ntBASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 MIR6805-201ENST00000615055 62 ntBASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AL162274.1-201ENST00000617191 1098 ntBASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCH2Q9Y6C5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 AC009477.1-201ENST00000452936 217 ntBASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCH2Q9Y6C5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCH2Q9Y6C5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PTCH2Q9Y6C5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCH2Q9Y6C5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCH2Q9Y6C5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTCH2Q9Y6C5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCH2Q9Y6C5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCH2Q9Y6C5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms