Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 AL591684.3-201ENST00000605187 298 ntBASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 SIGLEC16-201ENST00000599858 1437 ntBASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.43■□□□□ 0.86
CYP46A1Q9Y6A2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 ACTG1P4-201ENST00000425123 1122 ntBASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 NUS1P1-201ENST00000446295 882 ntBASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 KRT16P4-201ENST00000453883 522 ntBASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 AC138894.3-201ENST00000603787 634 ntBASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.42■□□□□ 0.86
CYP46A1Q9Y6A2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 FLJ38576-201ENST00000623820 2459 ntBASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 AC073592.4-201ENST00000623827 446 ntBASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CYP46A1Q9Y6A2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 AC097637.2-201ENST00000624096 1997 ntBASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 AC079776.2-201ENST00000641154 1609 ntBASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CYP46A1Q9Y6A2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms