Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 AP001094.4-201ENST00000579008 2176 ntBASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB1Q9Y5F3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 YBX2P1-201ENST00000394192 760 ntBASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 PMS2P2-201ENST00000425039 1128 ntBASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 AP001160.2-201ENST00000596071 487 ntBASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 AL355385.1-201ENST00000606123 409 ntBASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 AC093525.9-201ENST00000624961 1746 ntBASIC17.21■□□□□ 0.35
PCDHB1Q9Y5F3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.21■□□□□ 0.34
PCDHB1Q9Y5F3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB1Q9Y5F3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB1Q9Y5F3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 LTB4R2-202ENST00000528054 3092 ntBASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 AC112482.1-201ENST00000492080 688 ntBASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 AC008735.5-201ENST00000623544 497 ntBASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB1Q9Y5F3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms