Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCAF1Q9Y4C2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 LINC00982-205ENST00000420957 435 ntBASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 AGGF1P2-201ENST00000426656 2106 ntBASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.28■□□□□ 0.36
TCAF1Q9Y4C2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 BX005266.1-201ENST00000473402 457 ntBASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCAF1Q9Y4C2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TCAF1Q9Y4C2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCAF1Q9Y4C2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCAF1Q9Y4C2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCAF1Q9Y4C2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCAF1Q9Y4C2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCAF1Q9Y4C2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TCAF1Q9Y4C2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms