Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 AC023024.2-201ENST00000623561 1993 ntBASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHTOPQ9Y3Y2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 AC104640.1-201ENST00000562617 2109 ntBASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 GRK6P1-201ENST00000400595 1711 ntBASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 AC006015.1-201ENST00000429970 570 ntBASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHTOPQ9Y3Y2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms