Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGC3Q9UN70 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 AC005915.1-201ENST00000624912 2018 ntBASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 ELK2BP-201ENST00000415014 1224 ntBASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 AF186996.4-201ENST00000467186 377 ntBASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 AL805961.1-202ENST00000641562 540 ntBASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGC3Q9UN70 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 PTCHD3P3-201ENST00000403073 906 ntBASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 NIFKP4-201ENST00000567275 1192 ntBASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 AC008735.5-201ENST00000623544 497 ntBASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 AF228730.7-201ENST00000641842 219 ntBASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 TUBB8P12-201ENST00000308911 1335 ntBASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 TUBB7P-202ENST00000428444 1305 ntBASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 TUBB8P7-204ENST00000567960 1332 ntBASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC3Q9UN70 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 AP002469.2-201ENST00000531724 424 ntBASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 AL160237.2-201ENST00000556165 472 ntBASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 AC148477.8-201ENST00000624298 468 ntBASIC18.1■□□□□ 0.49
PCDHGC3Q9UN70 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms