Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 HILS1-202ENST00000545329 423 ntBASIC21.66■■□□□ 1.06
CCNL1Q9UK58 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 AC007967.4-201ENST00000614700 386 ntBASIC21.66■■□□□ 1.06
CCNL1Q9UK58 LINC01451-201ENST00000623792 534 ntBASIC21.66■■□□□ 1.06
CCNL1Q9UK58 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCNL1Q9UK58 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 HLA-V-204ENST00000476601 1289 ntBASIC21.65■■□□□ 1.06
CCNL1Q9UK58 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 AP3S2-216ENST00000617003 1561 ntBASIC21.65■■□□□ 1.06
CCNL1Q9UK58 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCNL1Q9UK58 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCNL1Q9UK58 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCNL1Q9UK58 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCNL1Q9UK58 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 AC009477.1-201ENST00000452936 217 ntBASIC21.64■■□□□ 1.05
CCNL1Q9UK58 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 AC010336.2-201ENST00000564226 506 ntBASIC21.64■■□□□ 1.05
CCNL1Q9UK58 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 AC138969.3-201ENST00000546612 1459 ntBASIC21.64■■□□□ 1.05
CCNL1Q9UK58 AC138932.2-201ENST00000548268 1459 ntBASIC21.64■■□□□ 1.05
CCNL1Q9UK58 AC126755.4-201ENST00000549796 1459 ntBASIC21.64■■□□□ 1.05
CCNL1Q9UK58 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.64■■□□□ 1.05
CCNL1Q9UK58 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 AL132655.2-201ENST00000596276 594 ntBASIC21.63■■□□□ 1.05
CCNL1Q9UK58 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNL1Q9UK58 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNL1Q9UK58 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms